Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 CD99P1-205ENST00000527459 561 ntBASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 KRT16P2-201ENST00000414673 1423 ntBASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDND2Q8NHS1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 FAM99A-202ENST00000538190 1989 ntBASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 AC005229.4-201ENST00000610085 2198 ntBASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 AC061975.6-201ENST00000579045 1553 ntBASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDND2Q8NHS1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 ABHD17AP1-201ENST00000358206 933 ntBASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 AC069152.1-201ENST00000438030 544 ntBASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 AC069236.1-201ENST00000604339 616 ntBASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 AC008694.1-202ENST00000636953 945 ntBASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDND2Q8NHS1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.52■□□□□ 0.39
CLDND2Q8NHS1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDND2Q8NHS1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 KRT18P6-201ENST00000555540 1265 ntBASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 OR10C1-204ENST00000622521 1039 ntBASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 AC133041.1-202ENST00000642053 222 ntBASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms