Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 NCF1B-203ENST00000435988 1254 ntBASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAM1L1Q8N609 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 AL512625.2-201ENST00000417533 625 ntBASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 AF201337.1-201ENST00000520239 748 ntBASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAM1L1Q8N609 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 AC007375.3-201ENST00000600936 2314 ntBASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 AC121338.2-201ENST00000622535 1744 ntBASIC20.47■□□□□ 0.87
TRAM1L1Q8N609 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 GPX1P1-201ENST00000388829 606 ntBASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 AC083906.2-201ENST00000511578 360 ntBASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 AC105036.2-201ENST00000569468 176 ntBASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAM1L1Q8N609 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 AC100791.3-201ENST00000617619 330 ntBASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRAM1L1Q8N609 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 AC093787.1-201ENST00000450396 207 ntBASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 AC005229.4-201ENST00000610085 2198 ntBASIC20.44■□□□□ 0.86
TRAM1L1Q8N609 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms