Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 AC087633.2-202ENST00000565166 1439 ntBASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 KRT18P68-201ENST00000392293 1000 ntBASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 AC007322.3-201ENST00000426526 701 ntBASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 TSPY7P-201ENST00000431358 1114 ntBASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 C2orf69P4-201ENST00000565394 541 ntBASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13DQ5THJ4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 AC245052.3-201ENST00000450182 901 ntBASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.05□□□□□ -0.16
VPS13DQ5THJ4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 AC239809.2-201ENST00000415381 517 ntBASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 RN7SL850P-201ENST00000579959 291 ntBASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 REXO1L12P-201ENST00000622156 912 ntBASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 AL049637.2-201ENST00000641778 930 ntBASIC14.04□□□□□ -0.16
VPS13DQ5THJ4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VPS13DQ5THJ4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms