Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.28■□□□□ 0.84
CACNA1EQ15878 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.28■□□□□ 0.84
CACNA1EQ15878 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CACNA1EQ15878 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CACNA1EQ15878 FAM99A-202ENST00000538190 1989 ntBASIC20.28■□□□□ 0.84
CACNA1EQ15878 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1EQ15878 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.28■□□□□ 0.84
CACNA1EQ15878 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1EQ15878 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CACNA1EQ15878 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1EQ15878 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1EQ15878 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 C9orf163-202ENST00000624034 2573 ntBASIC20.27■□□□□ 0.84
CACNA1EQ15878 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1EQ15878 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1EQ15878 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1EQ15878 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1EQ15878 AC124016.1-201ENST00000609552 612 ntBASIC20.27■□□□□ 0.84
CACNA1EQ15878 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1EQ15878 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CACNA1EQ15878 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CACNA1EQ15878 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1EQ15878 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1EQ15878 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1EQ15878 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 AL355075.4-201ENST00000554988 638 ntBASIC20.26■□□□□ 0.83
CACNA1EQ15878 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1EQ15878 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1EQ15878 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1EQ15878 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 AC233702.5-201ENST00000584107 538 ntBASIC20.26■□□□□ 0.83
CACNA1EQ15878 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.26■□□□□ 0.83
CACNA1EQ15878 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1EQ15878 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1EQ15878 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1EQ15878 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNA1EQ15878 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CACNA1EQ15878 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1EQ15878 AC239809.2-201ENST00000415381 517 ntBASIC20.25■□□□□ 0.83
CACNA1EQ15878 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CACNA1EQ15878 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1EQ15878 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1EQ15878 AL135905.2-201ENST00000584934 1404 ntBASIC20.25■□□□□ 0.83
CACNA1EQ15878 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1EQ15878 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNA1EQ15878 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1EQ15878 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1EQ15878 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1EQ15878 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1EQ15878 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CACNA1EQ15878 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 AC097493.4-201ENST00000641197 219 ntBASIC20.24■□□□□ 0.83
CACNA1EQ15878 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1EQ15878 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.24■□□□□ 0.83
CACNA1EQ15878 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.23■□□□□ 0.83
CACNA1EQ15878 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CACNA1EQ15878 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CACNA1EQ15878 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CACNA1EQ15878 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms