Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 YPR022CYPR022C 3402 nt3.52□□□□□ -1.85
NHX1Q04121 ALA1YOR335C 2877 nt3.52□□□□□ -1.85
NHX1Q04121 SSM4YIL030C 3960 nt3.52□□□□□ -1.85
NHX1Q04121 FAS1YKL182W 6156 nt3.51□□□□□ -1.85
NHX1Q04121 RNR1YER070W 2667 nt3.51□□□□□ -1.85
NHX1Q04121 YCR081C-AYCR081C-A 237 nt3.51□□□□□ -1.85
NHX1Q04121 YER038W-AYER038W-A 381 nt3.51□□□□□ -1.85
NHX1Q04121 SUP56tL(CAA)A 82 nt3.51□□□□□ -1.85
NHX1Q04121 SUP53tL(CAA)C 82 nt3.51□□□□□ -1.85
NHX1Q04121 tL(CAA)DtL(CAA)D 82 nt3.51□□□□□ -1.85
NHX1Q04121 tL(CAA)G1tL(CAA)G1 82 nt3.51□□□□□ -1.85
NHX1Q04121 SUP54tL(CAA)G2 82 nt3.51□□□□□ -1.85
NHX1Q04121 tL(CAA)G3tL(CAA)G3 82 nt3.51□□□□□ -1.85
NHX1Q04121 tL(CAA)KtL(CAA)K 82 nt3.51□□□□□ -1.85
NHX1Q04121 tL(CAA)LtL(CAA)L 82 nt3.51□□□□□ -1.85
NHX1Q04121 tL(CAA)MtL(CAA)M 82 nt3.51□□□□□ -1.85
NHX1Q04121 tL(CAA)NtL(CAA)N 82 nt3.51□□□□□ -1.85
NHX1Q04121 NBL1YHR199C-A 222 nt3.51□□□□□ -1.85
NHX1Q04121 RPS8AYBL072C 603 nt3.51□□□□□ -1.85
NHX1Q04121 NGL1YOL042W 1092 nt3.51□□□□□ -1.85
NHX1Q04121 XRN1YGL173C 4587 nt3.51□□□□□ -1.85
NHX1Q04121 RAD26YJR035W 3258 nt3.51□□□□□ -1.85
NHX1Q04121 RAD4YER162C 2265 nt3.5□□□□□ -1.85
NHX1Q04121 STN1YDR082W 1485 nt3.5□□□□□ -1.85
NHX1Q04121 YDR133CYDR133C 336 nt3.5□□□□□ -1.85
NHX1Q04121 HHT2YNL031C 411 nt3.5□□□□□ -1.85
NHX1Q04121 TIR2YOR010C 756 nt3.5□□□□□ -1.85
NHX1Q04121 GPX2YBR244W 489 nt3.5□□□□□ -1.85
NHX1Q04121 RAD2YGR258C 3096 nt3.5□□□□□ -1.85
NHX1Q04121 REG1YDR028C 3045 nt3.5□□□□□ -1.85
NHX1Q04121 UTP13YLR222C 2454 nt3.5□□□□□ -1.85
NHX1Q04121 MES1YGR264C 2256 nt3.5□□□□□ -1.85
NHX1Q04121 ARK1YNL020C 1917 nt3.5□□□□□ -1.85
NHX1Q04121 MNT3YIL014W 1893 nt3.5□□□□□ -1.85
NHX1Q04121 BNI4YNL233W 2679 nt3.49□□□□□ -1.85
NHX1Q04121 PES4YFR023W 1836 nt3.49□□□□□ -1.85
NHX1Q04121 YDR431WYDR431W 312 nt3.49□□□□□ -1.85
NHX1Q04121 LIF1YGL090W 1266 nt3.49□□□□□ -1.85
NHX1Q04121 YPS5YGL259W 498 nt3.49□□□□□ -1.85
NHX1Q04121 CRG1YHR209W 876 nt3.49□□□□□ -1.85
NHX1Q04121 YKL066WYKL066W 444 nt3.49□□□□□ -1.85
NHX1Q04121 YPR077CYPR077C 372 nt3.49□□□□□ -1.85
NHX1Q04121 FAA2YER015W 2235 nt3.49□□□□□ -1.85
NHX1Q04121 RSF2YJR127C 4143 nt3.49□□□□□ -1.85
NHX1Q04121 SKN7YHR206W 1869 nt3.49□□□□□ -1.85
NHX1Q04121 PWP2YCR057C 2772 nt3.49□□□□□ -1.85
NHX1Q04121 BYE1YKL005C 1785 nt3.48□□□□□ -1.85
NHX1Q04121 GPI17YDR434W 1605 nt3.48□□□□□ -1.85
NHX1Q04121 YHR214C-CYHR214C-C 1437 nt3.48□□□□□ -1.85
NHX1Q04121 SMB1YER029C 591 nt3.48□□□□□ -1.85
NHX1Q04121 MTC3YGL226W 372 nt3.48□□□□□ -1.85
NHX1Q04121 RAD14YMR201C 1116 nt3.48□□□□□ -1.85
NHX1Q04121 HSP10YOR020C 321 nt3.48□□□□□ -1.85
NHX1Q04121 YBR032WYBR032W 303 nt3.48□□□□□ -1.85
NHX1Q04121 YOR392WYOR392W 444 nt3.48□□□□□ -1.85
NHX1Q04121 MSH2YOL090W 2895 nt3.47□□□□□ -1.85
NHX1Q04121 AVT2YEL064C 1443 nt3.47□□□□□ -1.85
NHX1Q04121 LSM8YJR022W 330 nt3.47□□□□□ -1.85
NHX1Q04121 YLR230WYLR230W 306 nt3.47□□□□□ -1.85
NHX1Q04121 YOL134CYOL134C 390 nt3.47□□□□□ -1.85
NHX1Q04121 YPR108W-AYPR108W-A 213 nt3.47□□□□□ -1.85
NHX1Q04121 XRS2YDR369C 2565 nt3.46□□□□□ -1.86
NHX1Q04121 YGR121W-AYGR121W-A 216 nt3.46□□□□□ -1.86
NHX1Q04121 YIL012WYIL012W 342 nt3.46□□□□□ -1.86
NHX1Q04121 TEN1YLR010C 483 nt3.46□□□□□ -1.86
NHX1Q04121 YLR287CYLR287C 1068 nt3.46□□□□□ -1.86
NHX1Q04121 YOL150CYOL150C 312 nt3.46□□□□□ -1.86
NHX1Q04121 YPL080CYPL080C 327 nt3.46□□□□□ -1.86
NHX1Q04121 MDN1YLR106C 14733 nt3.46□□□□□ -1.86
NHX1Q04121 NSP1YJL041W 2472 nt3.46□□□□□ -1.86
NHX1Q04121 URA2YJL130C 6645 nt3.45□□□□□ -1.86
NHX1Q04121 RSC1YGR056W 2787 nt3.45□□□□□ -1.86
NHX1Q04121 GPI19YDR437W 423 nt3.45□□□□□ -1.86
NHX1Q04121 RPS23AYGR118W 438 nt3.45□□□□□ -1.86
NHX1Q04121 tV(CAC)DtV(CAC)D 73 nt3.45□□□□□ -1.86
NHX1Q04121 tV(CAC)HtV(CAC)H 73 nt3.45□□□□□ -1.86
NHX1Q04121 YML003WYML003W 873 nt3.45□□□□□ -1.86
NHX1Q04121 RFC3YNL290W 1023 nt3.45□□□□□ -1.86
NHX1Q04121 HEM4YOR278W 828 nt3.45□□□□□ -1.86
NHX1Q04121 SPA2YLL021W 4401 nt3.45□□□□□ -1.86
NHX1Q04121 YNR063WYNR063W 1824 nt3.44□□□□□ -1.86
NHX1Q04121 YJR030CYJR030C 2238 nt3.44□□□□□ -1.86
NHX1Q04121 YDR194W-AYDR194W-A 153 nt3.44□□□□□ -1.86
NHX1Q04121 YER068C-AYER068C-A 432 nt3.44□□□□□ -1.86
NHX1Q04121 RPL29YFR032C-A 180 nt3.44□□□□□ -1.86
NHX1Q04121 RRF1YHR038W 693 nt3.44□□□□□ -1.86
NHX1Q04121 YJR011CYJR011C 786 nt3.44□□□□□ -1.86
NHX1Q04121 ANB1YJR047C 474 nt3.44□□□□□ -1.86
NHX1Q04121 RPL22AYLR061W 366 nt3.44□□□□□ -1.86
NHX1Q04121 LSM2YBL026W 288 nt3.44□□□□□ -1.86
NHX1Q04121 SHH3YMR118C 591 nt3.44□□□□□ -1.86
NHX1Q04121 VPS3YDR495C 3036 nt3.44□□□□□ -1.86
NHX1Q04121 RAD5YLR032W 3510 nt3.43□□□□□ -1.86
NHX1Q04121 ATG26YLR189C 3597 nt3.43□□□□□ -1.86
NHX1Q04121 RPN2YIL075C 2838 nt3.43□□□□□ -1.86
NHX1Q04121 YER066C-AYER066C-A 501 nt3.43□□□□□ -1.86
NHX1Q04121 YAL026C-AYAL026C-A 438 nt3.43□□□□□ -1.86
NHX1Q04121 AIM26YKL037W 357 nt3.43□□□□□ -1.86
NHX1Q04121 PAU23YLR037C 375 nt3.43□□□□□ -1.86
NHX1Q04121 CDC33YOL139C 642 nt3.43□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms