Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 CD99P1-205ENST00000527459 561 ntBASIC19.3■□□□□ 0.68
SMSP52788 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.3■□□□□ 0.68
SMSP52788 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SMSP52788 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.3■□□□□ 0.68
SMSP52788 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMSP52788 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMSP52788 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMSP52788 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.29■□□□□ 0.68
SMSP52788 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMSP52788 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMSP52788 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.29■□□□□ 0.68
SMSP52788 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMSP52788 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.29■□□□□ 0.68
SMSP52788 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.29■□□□□ 0.68
SMSP52788 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMSP52788 AL121832.2-201ENST00000610979 668 ntBASIC19.29■□□□□ 0.68
SMSP52788 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMSP52788 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMSP52788 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.29■□□□□ 0.68
SMSP52788 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.29■□□□□ 0.68
SMSP52788 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMSP52788 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMSP52788 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.28■□□□□ 0.68
SMSP52788 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.28■□□□□ 0.68
SMSP52788 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMSP52788 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.28■□□□□ 0.68
SMSP52788 AL034346.1-201ENST00000568244 1277 ntBASIC19.28■□□□□ 0.68
SMSP52788 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMSP52788 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.28■□□□□ 0.68
SMSP52788 AC231657.2-201ENST00000624556 255 ntBASIC19.28■□□□□ 0.68
SMSP52788 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMSP52788 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SMSP52788 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SMSP52788 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.27■□□□□ 0.68
SMSP52788 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SMSP52788 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SMSP52788 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMSP52788 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMSP52788 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.27■□□□□ 0.67
SMSP52788 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
SMSP52788 AL049796.1-201ENST00000565336 1766 ntBASIC19.27■□□□□ 0.67
SMSP52788 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SMSP52788 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SMSP52788 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.26■□□□□ 0.67
SMSP52788 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SMSP52788 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.26■□□□□ 0.67
SMSP52788 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SMSP52788 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SMSP52788 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMSP52788 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.25■□□□□ 0.67
SMSP52788 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMSP52788 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
SMSP52788 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMSP52788 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMSP52788 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMSP52788 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMSP52788 KRT87P-202ENST00000534226 1464 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms