Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSKP43235 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CTSKP43235 AC091799.1-201ENST00000422823 811 ntBASIC20.58■□□□□ 0.89
CTSKP43235 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.58■□□□□ 0.89
CTSKP43235 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.58■□□□□ 0.89
CTSKP43235 AC026366.1-201ENST00000488803 879 ntBASIC20.58■□□□□ 0.89
CTSKP43235 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.58■□□□□ 0.89
CTSKP43235 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.58■□□□□ 0.89
CTSKP43235 FAM21FP-204ENST00000608637 956 ntBASIC20.58■□□□□ 0.89
CTSKP43235 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.58■□□□□ 0.89
CTSKP43235 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSKP43235 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSKP43235 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.58■□□□□ 0.89
CTSKP43235 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTSKP43235 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTSKP43235 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTSKP43235 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTSKP43235 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.57■□□□□ 0.88
CTSKP43235 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.57■□□□□ 0.88
CTSKP43235 AC142381.4-202ENST00000563973 229 ntBASIC20.57■□□□□ 0.88
CTSKP43235 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSKP43235 KRT17P1-201ENST00000399211 1546 ntBASIC20.57■□□□□ 0.88
CTSKP43235 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.57■□□□□ 0.88
CTSKP43235 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.57■□□□□ 0.88
CTSKP43235 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSKP43235 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.56■□□□□ 0.88
CTSKP43235 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
CTSKP43235 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSKP43235 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.56■□□□□ 0.88
CTSKP43235 AL355472.2-201ENST00000422958 438 ntBASIC20.56■□□□□ 0.88
CTSKP43235 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CTSKP43235 AL158047.1-201ENST00000445918 881 ntBASIC20.56■□□□□ 0.88
CTSKP43235 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.56■□□□□ 0.88
CTSKP43235 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.56■□□□□ 0.88
CTSKP43235 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSKP43235 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.56■□□□□ 0.88
CTSKP43235 AC100791.3-201ENST00000617619 330 ntBASIC20.56■□□□□ 0.88
CTSKP43235 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSKP43235 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CTSKP43235 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTSKP43235 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.56■□□□□ 0.88
CTSKP43235 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.56■□□□□ 0.88
CTSKP43235 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSKP43235 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSKP43235 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSKP43235 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CTSKP43235 AC092053.2-201ENST00000640557 1818 ntBASIC20.55■□□□□ 0.88
CTSKP43235 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CTSKP43235 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.55■□□□□ 0.88
CTSKP43235 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CTSKP43235 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CTSKP43235 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSKP43235 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSKP43235 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTSKP43235 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.55■□□□□ 0.88
CTSKP43235 AP003097.1-201ENST00000530657 1135 ntBASIC20.55■□□□□ 0.88
CTSKP43235 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
CTSKP43235 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSKP43235 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSKP43235 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTSKP43235 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CTSKP43235 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.54■□□□□ 0.88
CTSKP43235 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSKP43235 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.54■□□□□ 0.88
CTSKP43235 AC245052.3-201ENST00000450182 901 ntBASIC20.54■□□□□ 0.88
CTSKP43235 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSKP43235 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.54■□□□□ 0.88
CTSKP43235 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.54■□□□□ 0.88
CTSKP43235 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CTSKP43235 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.54■□□□□ 0.88
CTSKP43235 AC242852.2-201ENST00000615738 1807 ntBASIC20.54■□□□□ 0.88
CTSKP43235 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CTSKP43235 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSKP43235 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSKP43235 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CTSKP43235 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSKP43235 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSKP43235 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CTSKP43235 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.53■□□□□ 0.88
CTSKP43235 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSKP43235 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTSKP43235 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSKP43235 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.53■□□□□ 0.88
CTSKP43235 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSKP43235 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CTSKP43235 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.53■□□□□ 0.88
CTSKP43235 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.53■□□□□ 0.88
CTSKP43235 CDV3P1-201ENST00000471403 739 ntBASIC20.53■□□□□ 0.88
CTSKP43235 CYP2T3P-201ENST00000601990 817 ntBASIC20.53■□□□□ 0.88
CTSKP43235 AC073648.6-201ENST00000641589 218 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms