Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 FUS1YCL027W 1539 nt2.24□□□□□ -2.05
RTR1P40084 AFI1YOR129C 2682 nt2.24□□□□□ -2.05
RTR1P40084 YGL024WYGL024W 336 nt2.24□□□□□ -2.05
RTR1P40084 RIF2YLR453C 1188 nt2.24□□□□□ -2.05
RTR1P40084 DLT1YMR126C 1029 nt2.24□□□□□ -2.05
RTR1P40084 ARP7YPR034W 1434 nt2.24□□□□□ -2.05
RTR1P40084 USO1YDL058W 5373 nt2.23□□□□□ -2.05
RTR1P40084 PUF4YGL014W 2667 nt2.23□□□□□ -2.05
RTR1P40084 YER107W-AYER107W-A 321 nt2.23□□□□□ -2.05
RTR1P40084 MIG2YGL209W 1149 nt2.23□□□□□ -2.05
RTR1P40084 PFS1YHR185C 714 nt2.23□□□□□ -2.05
RTR1P40084 VPH2YKL119C 648 nt2.23□□□□□ -2.05
RTR1P40084 RNP1YLL046C 750 nt2.23□□□□□ -2.05
RTR1P40084 NYV1YLR093C 762 nt2.23□□□□□ -2.05
RTR1P40084 YML090WYML090W 387 nt2.23□□□□□ -2.05
RTR1P40084 DSE1YER124C 1722 nt2.22□□□□□ -2.05
RTR1P40084 YFR054CYFR054C 579 nt2.22□□□□□ -2.05
RTR1P40084 YIL012WYIL012W 342 nt2.22□□□□□ -2.05
RTR1P40084 YIL141WYIL141W 390 nt2.22□□□□□ -2.05
RTR1P40084 YLR169WYLR169W 354 nt2.22□□□□□ -2.05
RTR1P40084 YNL171CYNL171C 369 nt2.22□□□□□ -2.05
RTR1P40084 MER1YNL210W 813 nt2.22□□□□□ -2.05
RTR1P40084 YAP7YOL028C 738 nt2.22□□□□□ -2.05
RTR1P40084 YPR097WYPR097W 3222 nt2.22□□□□□ -2.05
RTR1P40084 RLF2YPR018W 1821 nt2.21□□□□□ -2.05
RTR1P40084 YEL1YBL060W 2064 nt2.21□□□□□ -2.06
RTR1P40084 TOF1YNL273W 3717 nt2.21□□□□□ -2.06
RTR1P40084 GPI19YDR437W 423 nt2.21□□□□□ -2.06
RTR1P40084 MPO1YGL010W 525 nt2.21□□□□□ -2.06
RTR1P40084 YKL165C-AYKL165C-A 234 nt2.21□□□□□ -2.06
RTR1P40084 PAU8YAL068C 363 nt2.21□□□□□ -2.06
RTR1P40084 PAU20YOL161C 363 nt2.21□□□□□ -2.06
RTR1P40084 MRPL40YPL173W 894 nt2.21□□□□□ -2.06
RTR1P40084 UBR1YGR184C 5853 nt2.21□□□□□ -2.06
RTR1P40084 RGA2YDR379W 3030 nt2.21□□□□□ -2.06
RTR1P40084 YRR1YOR162C 2433 nt2.2□□□□□ -2.06
RTR1P40084 YCR024C-BYCR024C-B 267 nt2.2□□□□□ -2.06
RTR1P40084 NRG1YDR043C 696 nt2.2□□□□□ -2.06
RTR1P40084 YGL039WYGL039W 1047 nt2.2□□□□□ -2.06
RTR1P40084 YHR180W-AYHR180W-A 183 nt2.2□□□□□ -2.06
RTR1P40084 YJR071WYJR071W 369 nt2.2□□□□□ -2.06
RTR1P40084 RGM1YMR182C 636 nt2.2□□□□□ -2.06
RTR1P40084 MRPL17YNL252C 846 nt2.2□□□□□ -2.06
RTR1P40084 IZH4YOL101C 939 nt2.2□□□□□ -2.06
RTR1P40084 YOR097CYOR097C 528 nt2.2□□□□□ -2.06
RTR1P40084 TRM82YDR165W 1335 nt2.19□□□□□ -2.06
RTR1P40084 SFB2YNL049C 2631 nt2.19□□□□□ -2.06
RTR1P40084 MRP49YKL167C 414 nt2.19□□□□□ -2.06
RTR1P40084 RMP1YLR145W 606 nt2.19□□□□□ -2.06
RTR1P40084 IRC21YMR073C 606 nt2.19□□□□□ -2.06
RTR1P40084 ESF2YNR054C 951 nt2.19□□□□□ -2.06
RTR1P40084 NOP12YOL041C 1380 nt2.19□□□□□ -2.06
RTR1P40084 HSH155YMR288W 2916 nt2.19□□□□□ -2.06
RTR1P40084 SRB4YER022W 2064 nt2.19□□□□□ -2.06
RTR1P40084 RTT107YHR154W 3213 nt2.19□□□□□ -2.06
RTR1P40084 RTP1YMR185W 2946 nt2.18□□□□□ -2.06
RTR1P40084 MYO4YAL029C 4416 nt2.18□□□□□ -2.06
RTR1P40084 YDR203WYDR203W 318 nt2.18□□□□□ -2.06
RTR1P40084 SDC1YDR469W 528 nt2.18□□□□□ -2.06
RTR1P40084 YER119C-AYER119C-A 372 nt2.18□□□□□ -2.06
RTR1P40084 YKL065W-AYKL065W-A 222 nt2.18□□□□□ -2.06
RTR1P40084 DYN3YMR299C 939 nt2.18□□□□□ -2.06
RTR1P40084 YOL166CYOL166C 339 nt2.18□□□□□ -2.06
RTR1P40084 HUA2YOR284W 732 nt2.18□□□□□ -2.06
RTR1P40084 YDR179W-AYDR179W-A 1392 nt2.18□□□□□ -2.06
RTR1P40084 COG3YER157W 2406 nt2.17□□□□□ -2.06
RTR1P40084 CFT1YDR301W 4074 nt2.17□□□□□ -2.06
RTR1P40084 CBS2YDR197W 1170 nt2.17□□□□□ -2.06
RTR1P40084 YER189WYER189W 369 nt2.17□□□□□ -2.06
RTR1P40084 YKL069WYKL069W 543 nt2.17□□□□□ -2.06
RTR1P40084 YLR302CYLR302C 363 nt2.17□□□□□ -2.06
RTR1P40084 RPS17AYML024W 411 nt2.17□□□□□ -2.06
RTR1P40084 YPR014CYPR014C 330 nt2.17□□□□□ -2.06
RTR1P40084 MBA1YBR185C 837 nt2.17□□□□□ -2.06
RTR1P40084 SNU114YKL173W 3027 nt2.17□□□□□ -2.06
RTR1P40084 ASI3YNL008C 2031 nt2.17□□□□□ -2.06
RTR1P40084 RIT1YMR283C 1542 nt2.17□□□□□ -2.06
RTR1P40084 YEL043WYEL043W 2871 nt2.16□□□□□ -2.06
RTR1P40084 IRC10YOL015W 1761 nt2.16□□□□□ -2.06
RTR1P40084 YGL117WYGL117W 798 nt2.16□□□□□ -2.06
RTR1P40084 YNL089CYNL089C 477 nt2.16□□□□□ -2.06
RTR1P40084 ICS2YBR157C 768 nt2.16□□□□□ -2.06
RTR1P40084 CBF2YGR140W 2871 nt2.16□□□□□ -2.06
RTR1P40084 FUS2YMR232W 2034 nt2.16□□□□□ -2.06
RTR1P40084 ARP5YNL059C 2268 nt2.16□□□□□ -2.06
RTR1P40084 MAL33YBR297W 1407 nt2.16□□□□□ -2.06
RTR1P40084 YLR154W-AYLR154W-A 186 nt2.15□□□□□ -2.07
RTR1P40084 HER1YOR227W 3741 nt2.15□□□□□ -2.07
RTR1P40084 ART10YLR392C 1557 nt2.15□□□□□ -2.07
RTR1P40084 SEC4YFL005W 648 nt2.14□□□□□ -2.07
RTR1P40084 YFL015CYFL015C 495 nt2.14□□□□□ -2.07
RTR1P40084 YGL118CYGL118C 438 nt2.14□□□□□ -2.07
RTR1P40084 YPL135C-AYPL135C-A 174 nt2.14□□□□□ -2.07
RTR1P40084 DCP2YNL118C 2913 nt2.14□□□□□ -2.07
RTR1P40084 BRE5YNR051C 1548 nt2.13□□□□□ -2.07
RTR1P40084 NUP192YJL039C 5052 nt2.13□□□□□ -2.07
RTR1P40084 UBC13YDR092W 462 nt2.13□□□□□ -2.07
RTR1P40084 ACB1YGR037C 264 nt2.13□□□□□ -2.07
RTR1P40084 IKI1YHR187W 930 nt2.13□□□□□ -2.07
RTR1P40084 YJL114WYJL114W 681 nt2.13□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 9.6 ms