Protein–RNA interactions for Protein: P18564

ITGB6, Integrin beta-6, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6P18564 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.58■□□□□ 0.89
ITGB6P18564 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITGB6P18564 AL109923.1-201ENST00000618799 583 ntBASIC20.58■□□□□ 0.89
ITGB6P18564 AC120498.10-201ENST00000621827 505 ntBASIC20.58■□□□□ 0.89
ITGB6P18564 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITGB6P18564 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
ITGB6P18564 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ITGB6P18564 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITGB6P18564 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITGB6P18564 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITGB6P18564 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.57■□□□□ 0.88
ITGB6P18564 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGB6P18564 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB6P18564 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB6P18564 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
ITGB6P18564 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ITGB6P18564 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB6P18564 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ITGB6P18564 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGB6P18564 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGB6P18564 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ITGB6P18564 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.57■□□□□ 0.88
ITGB6P18564 UBE2DNL-204ENST00000602536 740 ntBASIC20.57■□□□□ 0.88
ITGB6P18564 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB6P18564 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.57■□□□□ 0.88
ITGB6P18564 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB6P18564 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB6P18564 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB6P18564 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB6P18564 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB6P18564 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ITGB6P18564 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB6P18564 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ITGB6P18564 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGB6P18564 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB6P18564 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB6P18564 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB6P18564 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.56■□□□□ 0.88
ITGB6P18564 CROCCP5-201ENST00000436658 830 ntBASIC20.56■□□□□ 0.88
ITGB6P18564 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ITGB6P18564 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB6P18564 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGB6P18564 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB6P18564 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.56■□□□□ 0.88
ITGB6P18564 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB6P18564 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB6P18564 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB6P18564 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB6P18564 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB6P18564 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.55■□□□□ 0.88
ITGB6P18564 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGB6P18564 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGB6P18564 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.55■□□□□ 0.88
ITGB6P18564 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB6P18564 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB6P18564 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB6P18564 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB6P18564 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ITGB6P18564 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGB6P18564 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB6P18564 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ITGB6P18564 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB6P18564 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB6P18564 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB6P18564 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.54■□□□□ 0.88
ITGB6P18564 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB6P18564 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.54■□□□□ 0.88
ITGB6P18564 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.54■□□□□ 0.88
ITGB6P18564 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGB6P18564 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.54■□□□□ 0.88
ITGB6P18564 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB6P18564 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGB6P18564 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB6P18564 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ITGB6P18564 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB6P18564 KRT16P2-201ENST00000414673 1423 ntBASIC20.53■□□□□ 0.88
ITGB6P18564 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGB6P18564 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGB6P18564 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGB6P18564 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.53■□□□□ 0.88
ITGB6P18564 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ITGB6P18564 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITGB6P18564 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ITGB6P18564 NCF1B-203ENST00000435988 1254 ntBASIC20.53■□□□□ 0.88
ITGB6P18564 AC006970.2-201ENST00000450065 779 ntBASIC20.53■□□□□ 0.88
ITGB6P18564 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITGB6P18564 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.53■□□□□ 0.88
ITGB6P18564 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.53■□□□□ 0.88
ITGB6P18564 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGB6P18564 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGB6P18564 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ITGB6P18564 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ITGB6P18564 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITGB6P18564 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITGB6P18564 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ITGB6P18564 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ITGB6P18564 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ITGB6P18564 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITGB6P18564 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.52■□□□□ 0.88
ITGB6P18564 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms