Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LMNAP02545 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LMNAP02545 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.5■■□□□ 1.03
LMNAP02545 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMNAP02545 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LMNAP02545 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMNAP02545 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.5■■□□□ 1.03
LMNAP02545 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.5■■□□□ 1.03
LMNAP02545 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.5■■□□□ 1.03
LMNAP02545 AC211429.1-201ENST00000415277 523 ntBASIC21.5■■□□□ 1.03
LMNAP02545 BX276092.2-201ENST00000417668 665 ntBASIC21.5■■□□□ 1.03
LMNAP02545 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.5■■□□□ 1.03
LMNAP02545 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.5■■□□□ 1.03
LMNAP02545 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMNAP02545 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMNAP02545 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMNAP02545 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LMNAP02545 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.5■■□□□ 1.03
LMNAP02545 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMNAP02545 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMNAP02545 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LMNAP02545 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LMNAP02545 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMNAP02545 TERF1P5-201ENST00000477545 1207 ntBASIC21.49■■□□□ 1.03
LMNAP02545 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.49■■□□□ 1.03
LMNAP02545 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.49■■□□□ 1.03
LMNAP02545 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMNAP02545 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMNAP02545 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMNAP02545 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.49■■□□□ 1.03
LMNAP02545 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
LMNAP02545 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMNAP02545 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.48■■□□□ 1.03
LMNAP02545 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
LMNAP02545 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 AC069236.1-201ENST00000604339 616 ntBASIC21.48■■□□□ 1.03
LMNAP02545 AC073648.6-201ENST00000641589 218 ntBASIC21.48■■□□□ 1.03
LMNAP02545 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LMNAP02545 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LMNAP02545 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.48■■□□□ 1.03
LMNAP02545 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.48■■□□□ 1.03
LMNAP02545 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMNAP02545 AC004687.1-201ENST00000579003 1625 ntBASIC21.47■■□□□ 1.03
LMNAP02545 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
LMNAP02545 AC026366.1-201ENST00000488803 879 ntBASIC21.47■■□□□ 1.03
LMNAP02545 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 MIR4497-201ENST00000583208 89 ntBASIC21.47■■□□□ 1.03
LMNAP02545 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.47■■□□□ 1.03
LMNAP02545 REXO1L12P-201ENST00000622156 912 ntBASIC21.47■■□□□ 1.03
LMNAP02545 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LMNAP02545 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LMNAP02545 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LMNAP02545 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LMNAP02545 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LMNAP02545 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LMNAP02545 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LMNAP02545 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LMNAP02545 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
LMNAP02545 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LMNAP02545 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LMNAP02545 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.46■■□□□ 1.03
LMNAP02545 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
LMNAP02545 AC093787.1-201ENST00000450396 207 ntBASIC21.46■■□□□ 1.03
LMNAP02545 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.46■■□□□ 1.03
LMNAP02545 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.46■■□□□ 1.03
LMNAP02545 LINC01023-201ENST00000606054 436 ntBASIC21.46■■□□□ 1.03
LMNAP02545 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.46■■□□□ 1.03
LMNAP02545 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LMNAP02545 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LMNAP02545 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.46■■□□□ 1.03
LMNAP02545 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LMNAP02545 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.46■■□□□ 1.03
LMNAP02545 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LMNAP02545 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LMNAP02545 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LMNAP02545 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LMNAP02545 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LMNAP02545 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms