Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSPG5O95196 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSPG5O95196 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.2■■□□□ 1.14
CSPG5O95196 KRT17P3-201ENST00000420566 1262 ntBASIC22.2■■□□□ 1.14
CSPG5O95196 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.2■■□□□ 1.14
CSPG5O95196 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.2■■□□□ 1.14
CSPG5O95196 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.2■■□□□ 1.14
CSPG5O95196 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.2■■□□□ 1.14
CSPG5O95196 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.2■■□□□ 1.14
CSPG5O95196 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.2■■□□□ 1.14
CSPG5O95196 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.2■■□□□ 1.14
CSPG5O95196 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSPG5O95196 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSPG5O95196 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CSPG5O95196 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CSPG5O95196 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CSPG5O95196 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.2■■□□□ 1.14
CSPG5O95196 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
CSPG5O95196 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSPG5O95196 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CSPG5O95196 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CSPG5O95196 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
CSPG5O95196 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.19■■□□□ 1.14
CSPG5O95196 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.19■■□□□ 1.14
CSPG5O95196 FAM21FP-204ENST00000608637 956 ntBASIC22.19■■□□□ 1.14
CSPG5O95196 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSPG5O95196 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CSPG5O95196 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSPG5O95196 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CSPG5O95196 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.19■■□□□ 1.14
CSPG5O95196 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.19■■□□□ 1.14
CSPG5O95196 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CSPG5O95196 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
CSPG5O95196 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
CSPG5O95196 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
CSPG5O95196 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CSPG5O95196 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CSPG5O95196 AC010542.4-201ENST00000563151 1910 ntBASIC22.18■■□□□ 1.14
CSPG5O95196 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.18■■□□□ 1.14
CSPG5O95196 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CSPG5O95196 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CSPG5O95196 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CSPG5O95196 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
CSPG5O95196 MIR1224-201ENST00000408193 85 ntBASIC22.18■■□□□ 1.14
CSPG5O95196 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.18■■□□□ 1.14
CSPG5O95196 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CSPG5O95196 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.18■■□□□ 1.14
CSPG5O95196 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CSPG5O95196 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
CSPG5O95196 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.17■■□□□ 1.14
CSPG5O95196 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CSPG5O95196 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CSPG5O95196 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.17■■□□□ 1.14
CSPG5O95196 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.17■■□□□ 1.14
CSPG5O95196 AC073912.3-201ENST00000624414 853 ntBASIC22.17■■□□□ 1.14
CSPG5O95196 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.17■■□□□ 1.14
CSPG5O95196 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSPG5O95196 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSPG5O95196 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.16■■□□□ 1.14
CSPG5O95196 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.16■■□□□ 1.14
CSPG5O95196 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CSPG5O95196 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSPG5O95196 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSPG5O95196 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSPG5O95196 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSPG5O95196 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSPG5O95196 AC211429.1-201ENST00000415277 523 ntBASIC22.16■■□□□ 1.14
CSPG5O95196 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.16■■□□□ 1.14
CSPG5O95196 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.16■■□□□ 1.14
CSPG5O95196 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.16■■□□□ 1.14
CSPG5O95196 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSPG5O95196 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.16■■□□□ 1.14
CSPG5O95196 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.16■■□□□ 1.14
CSPG5O95196 KRT18P21-201ENST00000515767 1272 ntBASIC22.16■■□□□ 1.14
CSPG5O95196 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.16■■□□□ 1.14
CSPG5O95196 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.16■■□□□ 1.14
CSPG5O95196 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
CSPG5O95196 AC069544.1-201ENST00000609399 999 ntBASIC22.16■■□□□ 1.14
CSPG5O95196 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSPG5O95196 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSPG5O95196 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSPG5O95196 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSPG5O95196 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSPG5O95196 MCRIP2P1-201ENST00000394346 511 ntBASIC22.15■■□□□ 1.14
CSPG5O95196 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSPG5O95196 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSPG5O95196 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CSPG5O95196 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSPG5O95196 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CSPG5O95196 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms