Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDRT1O95170 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDRT1O95170 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.41■□□□□ 0.54
CDRT1O95170 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDRT1O95170 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.4■□□□□ 0.54
CDRT1O95170 AL162377.1-201ENST00000618844 1793 ntBASIC18.4■□□□□ 0.54
CDRT1O95170 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDRT1O95170 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.4■□□□□ 0.54
CDRT1O95170 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.4■□□□□ 0.54
CDRT1O95170 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.4■□□□□ 0.54
CDRT1O95170 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.4■□□□□ 0.54
CDRT1O95170 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDRT1O95170 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDRT1O95170 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CDRT1O95170 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDRT1O95170 AL356740.2-201ENST00000601559 647 ntBASIC18.4■□□□□ 0.54
CDRT1O95170 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDRT1O95170 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDRT1O95170 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.4■□□□□ 0.54
CDRT1O95170 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.4■□□□□ 0.54
CDRT1O95170 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.4■□□□□ 0.54
CDRT1O95170 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDRT1O95170 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDRT1O95170 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CDRT1O95170 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDRT1O95170 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDRT1O95170 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDRT1O95170 AC018445.3-201ENST00000624177 1945 ntBASIC18.39■□□□□ 0.53
CDRT1O95170 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.39■□□□□ 0.53
CDRT1O95170 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDRT1O95170 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CDRT1O95170 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CDRT1O95170 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDRT1O95170 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDRT1O95170 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDRT1O95170 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.39■□□□□ 0.53
CDRT1O95170 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDRT1O95170 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDRT1O95170 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.39■□□□□ 0.53
CDRT1O95170 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.39■□□□□ 0.53
CDRT1O95170 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.39■□□□□ 0.53
CDRT1O95170 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDRT1O95170 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDRT1O95170 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDRT1O95170 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDRT1O95170 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.39■□□□□ 0.53
CDRT1O95170 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDRT1O95170 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CDRT1O95170 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDRT1O95170 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.38■□□□□ 0.53
CDRT1O95170 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.38■□□□□ 0.53
CDRT1O95170 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.38■□□□□ 0.53
CDRT1O95170 MIR3181-201ENST00000578512 73 ntBASIC18.38■□□□□ 0.53
CDRT1O95170 AL035685.1-201ENST00000636663 812 ntBASIC18.38■□□□□ 0.53
CDRT1O95170 AC099778.1-201ENST00000568593 1911 ntBASIC18.38■□□□□ 0.53
CDRT1O95170 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.38■□□□□ 0.53
CDRT1O95170 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.38■□□□□ 0.53
CDRT1O95170 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.38■□□□□ 0.53
CDRT1O95170 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDRT1O95170 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CDRT1O95170 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.37■□□□□ 0.53
CDRT1O95170 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDRT1O95170 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.37■□□□□ 0.53
CDRT1O95170 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.37■□□□□ 0.53
CDRT1O95170 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.37■□□□□ 0.53
CDRT1O95170 AL034346.1-201ENST00000568244 1277 ntBASIC18.37■□□□□ 0.53
CDRT1O95170 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.37■□□□□ 0.53
CDRT1O95170 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.37■□□□□ 0.53
CDRT1O95170 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.37■□□□□ 0.53
CDRT1O95170 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms