Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 AL589743.5-201ENST00000616611 1050 ntBASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV10A0A0B4J240 GALC-202ENST00000393568 2054 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 CYP2T3P-201ENST00000601990 817 ntBASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 MYC-209ENST00000641252 345 ntBASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 AC233723.2-201ENST00000623798 2106 ntBASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV10A0A0B4J240 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV10A0A0B4J240 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAV10A0A0B4J240 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV10A0A0B4J240 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV10A0A0B4J240 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 POU5F1P3-201ENST00000428824 1078 ntBASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 AC083880.1-201ENST00000608266 535 ntBASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV10A0A0B4J240 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 KRT18P29-201ENST00000397031 1267 ntBASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 AL355472.2-201ENST00000422958 438 ntBASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV10A0A0B4J240 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 AC116050.2-201ENST00000612102 1779 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms