Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 MIR4758-201ENST00000577688 71 ntBASIC21.65■■□□□ 1.06
SCML2Q9UQR0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCML2Q9UQR0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SCML2Q9UQR0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCML2Q9UQR0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.65■■□□□ 1.06
SCML2Q9UQR0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.65■■□□□ 1.06
SCML2Q9UQR0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SCML2Q9UQR0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.64■■□□□ 1.06
SCML2Q9UQR0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 BX276092.2-201ENST00000417668 665 ntBASIC21.64■■□□□ 1.05
SCML2Q9UQR0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 AC069152.1-201ENST00000438030 544 ntBASIC21.64■■□□□ 1.05
SCML2Q9UQR0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.64■■□□□ 1.05
SCML2Q9UQR0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 AC092118.2-201ENST00000613495 667 ntBASIC21.63■■□□□ 1.05
SCML2Q9UQR0 AC133041.1-202ENST00000642053 222 ntBASIC21.63■■□□□ 1.05
SCML2Q9UQR0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML2Q9UQR0 AL024507.2-201ENST00000606070 2574 ntBASIC21.62■■□□□ 1.05
SCML2Q9UQR0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 MCRIP2P1-201ENST00000394346 511 ntBASIC21.62■■□□□ 1.05
SCML2Q9UQR0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 AC098934.4-201ENST00000564127 592 ntBASIC21.62■■□□□ 1.05
SCML2Q9UQR0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCML2Q9UQR0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.61■■□□□ 1.05
SCML2Q9UQR0 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 CYP2T3P-201ENST00000601990 817 ntBASIC21.61■■□□□ 1.05
SCML2Q9UQR0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML2Q9UQR0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms