Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AC079834.2-201ENST00000609776 1949 ntBASIC22.08■■□□□ 1.13
TLR9Q9NR96 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TLR9Q9NR96 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TLR9Q9NR96 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.08■■□□□ 1.13
TLR9Q9NR96 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.08■■□□□ 1.13
TLR9Q9NR96 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TLR9Q9NR96 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.08■■□□□ 1.13
TLR9Q9NR96 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.08■■□□□ 1.13
TLR9Q9NR96 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
TLR9Q9NR96 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.08■■□□□ 1.12
TLR9Q9NR96 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.08■■□□□ 1.12
TLR9Q9NR96 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.08■■□□□ 1.12
TLR9Q9NR96 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.08■■□□□ 1.12
TLR9Q9NR96 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TLR9Q9NR96 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TLR9Q9NR96 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TLR9Q9NR96 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TLR9Q9NR96 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TLR9Q9NR96 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.07■■□□□ 1.12
TLR9Q9NR96 Z99916.2-201ENST00000604037 246 ntBASIC22.07■■□□□ 1.12
TLR9Q9NR96 AC073912.3-201ENST00000624414 853 ntBASIC22.07■■□□□ 1.12
TLR9Q9NR96 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TLR9Q9NR96 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.06■■□□□ 1.12
TLR9Q9NR96 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TLR9Q9NR96 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
TLR9Q9NR96 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.06■■□□□ 1.12
TLR9Q9NR96 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TLR9Q9NR96 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.06■■□□□ 1.12
TLR9Q9NR96 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TLR9Q9NR96 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.06■■□□□ 1.12
TLR9Q9NR96 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TLR9Q9NR96 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.06■■□□□ 1.12
TLR9Q9NR96 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.06■■□□□ 1.12
TLR9Q9NR96 AC026471.6-201ENST00000622954 1905 ntBASIC22.06■■□□□ 1.12
TLR9Q9NR96 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TLR9Q9NR96 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.05■■□□□ 1.12
TLR9Q9NR96 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.05■■□□□ 1.12
TLR9Q9NR96 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TLR9Q9NR96 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TLR9Q9NR96 SNORA78-201ENST00000459373 127 ntBASIC22.05■■□□□ 1.12
TLR9Q9NR96 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.05■■□□□ 1.12
TLR9Q9NR96 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TLR9Q9NR96 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
TLR9Q9NR96 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.05■■□□□ 1.12
TLR9Q9NR96 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TLR9Q9NR96 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TLR9Q9NR96 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TLR9Q9NR96 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TLR9Q9NR96 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TLR9Q9NR96 CYP21A1P-202ENST00000354927 1481 ntBASIC22.04■■□□□ 1.12
TLR9Q9NR96 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TLR9Q9NR96 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TLR9Q9NR96 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TLR9Q9NR96 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TLR9Q9NR96 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TLR9Q9NR96 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TLR9Q9NR96 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TLR9Q9NR96 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.04■■□□□ 1.12
TLR9Q9NR96 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TLR9Q9NR96 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TLR9Q9NR96 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.03■■□□□ 1.12
TLR9Q9NR96 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TLR9Q9NR96 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.03■■□□□ 1.12
TLR9Q9NR96 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.03■■□□□ 1.12
TLR9Q9NR96 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TLR9Q9NR96 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TLR9Q9NR96 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.03■■□□□ 1.12
TLR9Q9NR96 POM121L13P-201ENST00000422362 380 ntBASIC22.03■■□□□ 1.12
TLR9Q9NR96 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.03■■□□□ 1.12
TLR9Q9NR96 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TLR9Q9NR96 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.03■■□□□ 1.12
TLR9Q9NR96 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
TLR9Q9NR96 AC105020.6-201ENST00000621523 1217 ntBASIC22.03■■□□□ 1.12
TLR9Q9NR96 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TLR9Q9NR96 AC010542.4-201ENST00000563151 1910 ntBASIC22.03■■□□□ 1.12
TLR9Q9NR96 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.03■■□□□ 1.12
TLR9Q9NR96 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.03■■□□□ 1.12
TLR9Q9NR96 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.03■■□□□ 1.12
TLR9Q9NR96 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms