Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 AC083880.1-201ENST00000608266 535 ntBASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 CDV3P1-201ENST00000471403 739 ntBASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 MYC-209ENST00000641252 345 ntBASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
ATP6V0A1Q93050 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 ITM2C-210ENST00000620962 501 ntBASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.23■■□□□ 1.31
ATP6V0A1Q93050 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 KRT18P29-201ENST00000397031 1267 ntBASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 AC091874.3-201ENST00000512672 1195 ntBASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 AC008687.6-201ENST00000596318 630 ntBASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP6V0A1Q93050 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.21■■□□□ 1.31
ATP6V0A1Q93050 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6V0A1Q93050 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6V0A1Q93050 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.21■■□□□ 1.31
ATP6V0A1Q93050 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.21■■□□□ 1.31
ATP6V0A1Q93050 FAM21FP-204ENST00000608637 956 ntBASIC23.21■■□□□ 1.31
ATP6V0A1Q93050 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6V0A1Q93050 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
ATP6V0A1Q93050 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6V0A1Q93050 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6V0A1Q93050 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 DUSP5P2-201ENST00000426873 1033 ntBASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 Z98882.1-201ENST00000622160 2253 ntBASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP6V0A1Q93050 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms