Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 AC061975.6-201ENST00000579045 1553 ntBASIC20.96■□□□□ 0.95
PTCD2Q8WV60 AC006128.1-201ENST00000624704 1661 ntBASIC20.96■□□□□ 0.95
PTCD2Q8WV60 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PTCD2Q8WV60 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCD2Q8WV60 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 AC010141.2-201ENST00000452426 721 ntBASIC20.94■□□□□ 0.94
PTCD2Q8WV60 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 MFSD11-216ENST00000590393 1141 ntBASIC20.94■□□□□ 0.94
PTCD2Q8WV60 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 BID-214ENST00000617586 542 ntTSL 5 BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 AC121338.2-201ENST00000622535 1744 ntBASIC20.94■□□□□ 0.94
PTCD2Q8WV60 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCD2Q8WV60 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTCD2Q8WV60 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 PLK5-205ENST00000642079 1969 ntBASIC20.92■□□□□ 0.94
PTCD2Q8WV60 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 KRT16P2-201ENST00000414673 1423 ntBASIC20.92■□□□□ 0.94
PTCD2Q8WV60 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCD2Q8WV60 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 AL121603.2-201ENST00000557373 2117 ntBASIC20.91■□□□□ 0.94
PTCD2Q8WV60 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCD2Q8WV60 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.9■□□□□ 0.94
PTCD2Q8WV60 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
PTCD2Q8WV60 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PTCD2Q8WV60 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCD2Q8WV60 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.9■□□□□ 0.94
PTCD2Q8WV60 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCD2Q8WV60 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCD2Q8WV60 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms