Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KRT18P29-201ENST00000397031 1267 ntBASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 AC245052.3-201ENST00000450182 901 ntBASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 FAM99A-202ENST00000538190 1989 ntBASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 PRORSD1P-201ENST00000295112 541 ntBASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHKBP1Q8TBC3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 AL355472.2-201ENST00000422958 438 ntBASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 FAM21FP-204ENST00000608637 956 ntBASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHKBP1Q8TBC3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHKBP1Q8TBC3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 KRT17P1-201ENST00000399211 1546 ntBASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 LSM12P1-201ENST00000411836 588 ntBASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHKBP1Q8TBC3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.77■■□□□ 1.07
SHKBP1Q8TBC3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SHKBP1Q8TBC3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 ESRRAP1-201ENST00000400596 1257 ntBASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms