Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DNAAF3Q8N9W5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DNAAF3Q8N9W5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNAAF3Q8N9W5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNAAF3Q8N9W5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNAAF3Q8N9W5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNAAF3Q8N9W5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 AC138907.5-202ENST00000569484 235 ntBASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.05■□□□□ 0.96
DNAAF3Q8N9W5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 AC120498.10-201ENST00000621827 505 ntBASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.04■□□□□ 0.96
DNAAF3Q8N9W5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 TERF1P2-201ENST00000583350 1212 ntBASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF3Q8N9W5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 CCDC92B-201ENST00000575506 885 ntBASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 AC104187.1-201ENST00000607510 612 ntBASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
DNAAF3Q8N9W5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
DNAAF3Q8N9W5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 KRT18P14-201ENST00000534205 1250 ntBASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms