Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 OR7E47P-201ENST00000546390 1422 ntBASIC19.89■□□□□ 0.77
RNF220Q5VTB9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF220Q5VTB9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 AL136116.3-201ENST00000402907 1138 ntBASIC19.87■□□□□ 0.77
RNF220Q5VTB9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF220Q5VTB9 OXCT2P1-201ENST00000447263 1535 ntBASIC19.86■□□□□ 0.77
RNF220Q5VTB9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 AP005212.1-201ENST00000581547 1997 ntBASIC19.86■□□□□ 0.77
RNF220Q5VTB9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF220Q5VTB9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 SLC47A1P1-202ENST00000449666 945 ntBASIC19.85■□□□□ 0.77
RNF220Q5VTB9 AP005435.1-201ENST00000529293 1178 ntBASIC19.85■□□□□ 0.77
RNF220Q5VTB9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF220Q5VTB9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.84■□□□□ 0.77
RNF220Q5VTB9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms