Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.35■□□□□ 0.21
CDC34P49427 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDC34P49427 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.35■□□□□ 0.21
CDC34P49427 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC34P49427 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC34P49427 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDC34P49427 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC34P49427 AP004607.7-201ENST00000527152 1677 ntBASIC16.34■□□□□ 0.21
CDC34P49427 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.34■□□□□ 0.21
CDC34P49427 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CDC34P49427 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC34P49427 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC34P49427 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC34P49427 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC34P49427 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDC34P49427 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDC34P49427 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.34■□□□□ 0.21
CDC34P49427 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC34P49427 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDC34P49427 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.34■□□□□ 0.21
CDC34P49427 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDC34P49427 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CDC34P49427 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDC34P49427 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC34P49427 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.34■□□□□ 0.21
CDC34P49427 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.34■□□□□ 0.21
CDC34P49427 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.34■□□□□ 0.21
CDC34P49427 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CDC34P49427 AC112907.3-201ENST00000577781 2400 ntBASIC16.34■□□□□ 0.21
CDC34P49427 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDC34P49427 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.33■□□□□ 0.21
CDC34P49427 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDC34P49427 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDC34P49427 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.33■□□□□ 0.21
CDC34P49427 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC34P49427 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC34P49427 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC34P49427 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC34P49427 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC34P49427 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC34P49427 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC34P49427 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC34P49427 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC34P49427 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC34P49427 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDC34P49427 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDC34P49427 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDC34P49427 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDC34P49427 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDC34P49427 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC34P49427 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDC34P49427 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC34P49427 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC34P49427 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC34P49427 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC34P49427 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC34P49427 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC34P49427 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC34P49427 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CDC34P49427 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDC34P49427 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CDC34P49427 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC34P49427 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC34P49427 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC34P49427 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC34P49427 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC34P49427 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDC34P49427 AC092028.1-203ENST00000608262 953 ntBASIC16.32■□□□□ 0.2
CDC34P49427 pRNA.6-201ENST00000610482 90 ntBASIC16.32■□□□□ 0.2
CDC34P49427 pRNA.5-201ENST00000612139 90 ntBASIC16.32■□□□□ 0.2
CDC34P49427 pRNA.11-201ENST00000618423 90 ntBASIC16.32■□□□□ 0.2
CDC34P49427 pRNA.13-201ENST00000619112 90 ntBASIC16.32■□□□□ 0.2
CDC34P49427 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC34P49427 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC34P49427 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.31■□□□□ 0.2
CDC34P49427 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDC34P49427 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC34P49427 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.31■□□□□ 0.2
CDC34P49427 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDC34P49427 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms