Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RFC4P35249 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFC4P35249 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
RFC4P35249 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RFC4P35249 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RFC4P35249 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFC4P35249 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFC4P35249 LY6E-205ENST00000519611 635 ntTSL 3 BASIC26.26■■□□□ 1.79
RFC4P35249 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
RFC4P35249 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RFC4P35249 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.26■■□□□ 1.79
RFC4P35249 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
RFC4P35249 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFC4P35249 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RFC4P35249 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RFC4P35249 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
RFC4P35249 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RFC4P35249 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RFC4P35249 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RFC4P35249 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.25■■□□□ 1.79
RFC4P35249 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.25■■□□□ 1.79
RFC4P35249 AC124016.1-201ENST00000609552 612 ntBASIC26.25■■□□□ 1.79
RFC4P35249 AL023875.1-201ENST00000640777 796 ntBASIC26.25■■□□□ 1.79
RFC4P35249 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.25■■□□□ 1.79
RFC4P35249 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.25■■□□□ 1.79
RFC4P35249 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFC4P35249 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
RFC4P35249 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RFC4P35249 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.24■■□□□ 1.79
RFC4P35249 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.24■■□□□ 1.79
RFC4P35249 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFC4P35249 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RFC4P35249 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RFC4P35249 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.23■■□□□ 1.79
RFC4P35249 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.23■■□□□ 1.79
RFC4P35249 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC26.23■■□□□ 1.79
RFC4P35249 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.23■■□□□ 1.79
RFC4P35249 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.23■■□□□ 1.79
RFC4P35249 C2orf69P4-201ENST00000565394 541 ntBASIC26.23■■□□□ 1.79
RFC4P35249 AP001412.1-201ENST00000608405 714 ntBASIC26.23■■□□□ 1.79
RFC4P35249 AL049637.2-201ENST00000641778 930 ntBASIC26.23■■□□□ 1.79
RFC4P35249 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 AC010542.4-201ENST00000563151 1910 ntBASIC26.23■■□□□ 1.79
RFC4P35249 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
RFC4P35249 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC4P35249 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFC4P35249 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RFC4P35249 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RFC4P35249 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.22■■□□□ 1.79
RFC4P35249 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.22■■□□□ 1.79
RFC4P35249 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RFC4P35249 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.22■■□□□ 1.79
RFC4P35249 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFC4P35249 AC133681.1-201ENST00000465482 601 ntBASIC26.22■■□□□ 1.79
RFC4P35249 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.22■■□□□ 1.79
RFC4P35249 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
RFC4P35249 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.22■■□□□ 1.79
RFC4P35249 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFC4P35249 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFC4P35249 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.22■■□□□ 1.79
RFC4P35249 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFC4P35249 AC068473.5-201ENST00000616428 2072 ntBASIC26.21■■□□□ 1.79
RFC4P35249 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RFC4P35249 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
RFC4P35249 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.21■■□□□ 1.79
RFC4P35249 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
RFC4P35249 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.21■■□□□ 1.79
RFC4P35249 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.21■■□□□ 1.79
RFC4P35249 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RFC4P35249 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.21■■□□□ 1.79
RFC4P35249 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.21■■□□□ 1.79
RFC4P35249 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
RFC4P35249 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RFC4P35249 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RFC4P35249 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.21■■□□□ 1.79
RFC4P35249 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
RFC4P35249 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.21■■□□□ 1.79
RFC4P35249 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.2■■□□□ 1.79
RFC4P35249 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RFC4P35249 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.2■■□□□ 1.79
RFC4P35249 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.79
RFC4P35249 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.2■■□□□ 1.79
RFC4P35249 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFC4P35249 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFC4P35249 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.2■■□□□ 1.78
RFC4P35249 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
RFC4P35249 AC239809.2-201ENST00000415381 517 ntBASIC26.2■■□□□ 1.78
RFC4P35249 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms