Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCN1O60741 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HCN1O60741 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HCN1O60741 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.31■□□□□ 0.68
HCN1O60741 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
HCN1O60741 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.31■□□□□ 0.68
HCN1O60741 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HCN1O60741 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.31■□□□□ 0.68
HCN1O60741 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.31■□□□□ 0.68
HCN1O60741 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HCN1O60741 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.31■□□□□ 0.68
HCN1O60741 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCN1O60741 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.31■□□□□ 0.68
HCN1O60741 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCN1O60741 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCN1O60741 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCN1O60741 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HCN1O60741 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.3■□□□□ 0.68
HCN1O60741 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.3■□□□□ 0.68
HCN1O60741 AC073111.5-205ENST00000641717 521 ntBASIC19.3■□□□□ 0.68
HCN1O60741 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HCN1O60741 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCN1O60741 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HCN1O60741 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.3■□□□□ 0.68
HCN1O60741 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCN1O60741 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCN1O60741 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.3■□□□□ 0.68
HCN1O60741 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.3■□□□□ 0.68
HCN1O60741 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HCN1O60741 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HCN1O60741 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCN1O60741 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HCN1O60741 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HCN1O60741 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HCN1O60741 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
HCN1O60741 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 CDCA4P2-201ENST00000441182 718 ntBASIC19.29■□□□□ 0.68
HCN1O60741 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.29■□□□□ 0.68
HCN1O60741 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.29■□□□□ 0.68
HCN1O60741 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCN1O60741 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.29■□□□□ 0.68
HCN1O60741 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCN1O60741 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCN1O60741 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HCN1O60741 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HCN1O60741 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.28■□□□□ 0.68
HCN1O60741 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.28■□□□□ 0.68
HCN1O60741 AC026185.1-201ENST00000445748 174 ntBASIC19.28■□□□□ 0.68
HCN1O60741 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.28■□□□□ 0.68
HCN1O60741 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.28■□□□□ 0.68
HCN1O60741 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.28■□□□□ 0.68
HCN1O60741 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCN1O60741 AP001160.3-201ENST00000601484 763 ntBASIC19.28■□□□□ 0.68
HCN1O60741 RAP2CP1-201ENST00000605103 478 ntBASIC19.28■□□□□ 0.68
HCN1O60741 AC011767.1-201ENST00000617410 1153 ntBASIC19.28■□□□□ 0.68
HCN1O60741 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCN1O60741 AP006587.3-201ENST00000525742 1516 ntBASIC19.28■□□□□ 0.68
HCN1O60741 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCN1O60741 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCN1O60741 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCN1O60741 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCN1O60741 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.27■□□□□ 0.68
HCN1O60741 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCN1O60741 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
HCN1O60741 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCN1O60741 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.27■□□□□ 0.68
HCN1O60741 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCN1O60741 ID1-201ENST00000376105 1233 ntBASIC19.27■□□□□ 0.68
HCN1O60741 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.27■□□□□ 0.68
HCN1O60741 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCN1O60741 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCN1O60741 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.27■□□□□ 0.68
HCN1O60741 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.27■□□□□ 0.68
HCN1O60741 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCN1O60741 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.27■□□□□ 0.68
HCN1O60741 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms