Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH7O60245 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH7O60245 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PCDH7O60245 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PCDH7O60245 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.78■□□□□ 0.76
PCDH7O60245 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH7O60245 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH7O60245 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH7O60245 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH7O60245 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH7O60245 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.78■□□□□ 0.76
PCDH7O60245 KRT18P14-201ENST00000534205 1250 ntBASIC19.78■□□□□ 0.76
PCDH7O60245 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDH7O60245 DUX4L2-201ENST00000561772 1275 ntBASIC19.78■□□□□ 0.76
PCDH7O60245 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDH7O60245 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
PCDH7O60245 AC120498.10-201ENST00000621827 505 ntBASIC19.78■□□□□ 0.76
PCDH7O60245 DUX4L6-201ENST00000626483 1275 ntBASIC19.78■□□□□ 0.76
PCDH7O60245 DUX4L1-201ENST00000627662 1275 ntBASIC19.78■□□□□ 0.76
PCDH7O60245 DUX4L8-201ENST00000629013 1275 ntBASIC19.78■□□□□ 0.76
PCDH7O60245 DUX4L3-201ENST00000630187 1275 ntBASIC19.78■□□□□ 0.76
PCDH7O60245 DUX4L7-201ENST00000630678 1275 ntBASIC19.78■□□□□ 0.76
PCDH7O60245 DUX4L5-201ENST00000630834 1275 ntBASIC19.78■□□□□ 0.76
PCDH7O60245 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH7O60245 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH7O60245 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH7O60245 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH7O60245 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH7O60245 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH7O60245 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PCDH7O60245 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 KRT16P2-201ENST00000414673 1423 ntBASIC19.77■□□□□ 0.76
PCDH7O60245 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH7O60245 SLC25A24-204ENST00000569674 2357 ntBASIC19.77■□□□□ 0.76
PCDH7O60245 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH7O60245 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PCDH7O60245 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PCDH7O60245 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDH7O60245 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH7O60245 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH7O60245 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PCDH7O60245 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDH7O60245 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDH7O60245 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH7O60245 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
PCDH7O60245 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH7O60245 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH7O60245 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
PCDH7O60245 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH7O60245 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH7O60245 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH7O60245 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH7O60245 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.76■□□□□ 0.75
PCDH7O60245 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDH7O60245 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH7O60245 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDH7O60245 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PCDH7O60245 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH7O60245 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH7O60245 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDH7O60245 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH7O60245 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH7O60245 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCDH7O60245 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH7O60245 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH7O60245 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDH7O60245 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH7O60245 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDH7O60245 AP001160.3-201ENST00000601484 763 ntBASIC19.75■□□□□ 0.75
PCDH7O60245 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH7O60245 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH7O60245 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH7O60245 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH7O60245 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH7O60245 FEM1AP1-201ENST00000431297 1995 ntBASIC19.75■□□□□ 0.75
PCDH7O60245 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH7O60245 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH7O60245 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH7O60245 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH7O60245 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH7O60245 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH7O60245 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PCDH7O60245 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH7O60245 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH7O60245 AC245052.3-201ENST00000450182 901 ntBASIC19.74■□□□□ 0.75
PCDH7O60245 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDH7O60245 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PCDH7O60245 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH7O60245 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDH7O60245 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH7O60245 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms