Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD4O14678 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD4O14678 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD4O14678 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD4O14678 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ABCD4O14678 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ABCD4O14678 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCD4O14678 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCD4O14678 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCD4O14678 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCD4O14678 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.29■□□□□ 0.52
ABCD4O14678 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCD4O14678 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCD4O14678 SLC7A5P2-201ENST00000553010 536 ntBASIC18.29■□□□□ 0.52
ABCD4O14678 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCD4O14678 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.29■□□□□ 0.52
ABCD4O14678 AL109923.1-201ENST00000618799 583 ntBASIC18.29■□□□□ 0.52
ABCD4O14678 AC010536.3-201ENST00000620306 533 ntBASIC18.29■□□□□ 0.52
ABCD4O14678 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCD4O14678 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD4O14678 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.28■□□□□ 0.52
ABCD4O14678 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.28■□□□□ 0.52
ABCD4O14678 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.28■□□□□ 0.52
ABCD4O14678 NCF1B-203ENST00000435988 1254 ntBASIC18.28■□□□□ 0.52
ABCD4O14678 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.28■□□□□ 0.52
ABCD4O14678 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.28■□□□□ 0.52
ABCD4O14678 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.28■□□□□ 0.52
ABCD4O14678 AC104771.1-201ENST00000603335 964 ntBASIC18.28■□□□□ 0.52
ABCD4O14678 AC005181.1-201ENST00000604782 1256 ntBASIC18.28■□□□□ 0.52
ABCD4O14678 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ABCD4O14678 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.28■□□□□ 0.52
ABCD4O14678 AC242852.2-201ENST00000615738 1807 ntBASIC18.28■□□□□ 0.52
ABCD4O14678 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
ABCD4O14678 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.27■□□□□ 0.52
ABCD4O14678 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ABCD4O14678 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ABCD4O14678 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ABCD4O14678 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ABCD4O14678 GPX1P1-201ENST00000388829 606 ntBASIC18.27■□□□□ 0.52
ABCD4O14678 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.27■□□□□ 0.52
ABCD4O14678 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ABCD4O14678 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ABCD4O14678 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ABCD4O14678 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
ABCD4O14678 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ABCD4O14678 AC003102.1-202ENST00000563394 1796 ntBASIC18.27■□□□□ 0.51
ABCD4O14678 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ABCD4O14678 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.27■□□□□ 0.51
ABCD4O14678 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
ABCD4O14678 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ABCD4O14678 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ABCD4O14678 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ABCD4O14678 SLC7A5P1-201ENST00000568957 537 ntBASIC18.26■□□□□ 0.51
ABCD4O14678 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.26■□□□□ 0.51
ABCD4O14678 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ABCD4O14678 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ABCD4O14678 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ABCD4O14678 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.26■□□□□ 0.51
ABCD4O14678 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ABCD4O14678 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
ABCD4O14678 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCD4O14678 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCD4O14678 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ABCD4O14678 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
ABCD4O14678 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.25■□□□□ 0.51
ABCD4O14678 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCD4O14678 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ABCD4O14678 AL355802.2-201ENST00000402069 882 ntBASIC18.25■□□□□ 0.51
ABCD4O14678 POU5F1P4-201ENST00000413175 1085 ntBASIC18.25■□□□□ 0.51
ABCD4O14678 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.25■□□□□ 0.51
ABCD4O14678 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCD4O14678 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.25■□□□□ 0.51
ABCD4O14678 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ABCD4O14678 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
ABCD4O14678 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
ABCD4O14678 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.25■□□□□ 0.51
ABCD4O14678 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.25■□□□□ 0.51
ABCD4O14678 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ABCD4O14678 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCD4O14678 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms