Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
OtpO09113 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
OtpO09113 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
OtpO09113 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.16■□□□□ 0.18
OtpO09113 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OtpO09113 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OtpO09113 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
OtpO09113 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
OtpO09113 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
OtpO09113 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
OtpO09113 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
OtpO09113 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OtpO09113 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
OtpO09113 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
OtpO09113 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
OtpO09113 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
OtpO09113 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
OtpO09113 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.14■□□□□ 0.17
OtpO09113 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.14■□□□□ 0.17
OtpO09113 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OtpO09113 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
OtpO09113 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.13■□□□□ 0.17
OtpO09113 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.13■□□□□ 0.17
OtpO09113 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.13■□□□□ 0.17
OtpO09113 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.13■□□□□ 0.17
OtpO09113 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
OtpO09113 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OtpO09113 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.12■□□□□ 0.17
OtpO09113 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
OtpO09113 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.12■□□□□ 0.17
OtpO09113 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.12■□□□□ 0.17
OtpO09113 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.12■□□□□ 0.17
OtpO09113 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
OtpO09113 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.12■□□□□ 0.17
OtpO09113 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
OtpO09113 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
OtpO09113 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OtpO09113 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
OtpO09113 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
OtpO09113 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OtpO09113 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
OtpO09113 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OtpO09113 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.11■□□□□ 0.17
OtpO09113 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
OtpO09113 AV356131-201ENSMUST00000206201 750 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms