Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
EIF3FO00303 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3FO00303 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3FO00303 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3FO00303 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3FO00303 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3FO00303 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3FO00303 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
EIF3FO00303 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.28■□□□□ 0.84
EIF3FO00303 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.28■□□□□ 0.84
EIF3FO00303 KRT18P5-201ENST00000436075 1291 ntBASIC20.28■□□□□ 0.84
EIF3FO00303 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3FO00303 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.28■□□□□ 0.84
EIF3FO00303 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
EIF3FO00303 UBE2DNL-204ENST00000602536 740 ntBASIC20.28■□□□□ 0.84
EIF3FO00303 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
EIF3FO00303 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
EIF3FO00303 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3FO00303 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3FO00303 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3FO00303 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
EIF3FO00303 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3FO00303 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3FO00303 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.27■□□□□ 0.84
EIF3FO00303 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3FO00303 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3FO00303 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3FO00303 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.27■□□□□ 0.84
EIF3FO00303 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.27■□□□□ 0.84
EIF3FO00303 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3FO00303 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3FO00303 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.27■□□□□ 0.83
EIF3FO00303 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EIF3FO00303 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.27■□□□□ 0.83
EIF3FO00303 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 AC116050.2-201ENST00000612102 1779 ntBASIC20.26■□□□□ 0.83
EIF3FO00303 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
EIF3FO00303 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
EIF3FO00303 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
EIF3FO00303 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.26■□□□□ 0.83
EIF3FO00303 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.26■□□□□ 0.83
EIF3FO00303 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.26■□□□□ 0.83
EIF3FO00303 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.26■□□□□ 0.83
EIF3FO00303 MIR5787-201ENST00000611784 55 ntBASIC20.26■□□□□ 0.83
EIF3FO00303 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
EIF3FO00303 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.26■□□□□ 0.83
EIF3FO00303 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
EIF3FO00303 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.26■□□□□ 0.83
EIF3FO00303 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
EIF3FO00303 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3FO00303 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.26■□□□□ 0.83
EIF3FO00303 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.25■□□□□ 0.83
EIF3FO00303 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.25■□□□□ 0.83
EIF3FO00303 AC091799.1-201ENST00000422823 811 ntBASIC20.25■□□□□ 0.83
EIF3FO00303 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.25■□□□□ 0.83
EIF3FO00303 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
EIF3FO00303 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.25■□□□□ 0.83
EIF3FO00303 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3FO00303 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
EIF3FO00303 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
EIF3FO00303 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3FO00303 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3FO00303 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.24■□□□□ 0.83
EIF3FO00303 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
EIF3FO00303 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.24■□□□□ 0.83
EIF3FO00303 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
EIF3FO00303 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.24■□□□□ 0.83
EIF3FO00303 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3FO00303 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.24■□□□□ 0.83
EIF3FO00303 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.24■□□□□ 0.83
EIF3FO00303 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
EIF3FO00303 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3FO00303 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
EIF3FO00303 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
EIF3FO00303 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3FO00303 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms