Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Gm6085-201ENSMUST00000182774 1470 ntBASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv8-28A0A0G2JE47 Gm43294-201ENSMUST00000202850 2490 ntBASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv8-28A0A0G2JE47 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Gm27045-201ENSMUST00000182145 1402 ntBASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Gm45906-201ENSMUST00000208911 1430 ntBASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Gm10657-201ENSMUST00000193528 1031 ntBASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Gm42911-201ENSMUST00000199360 1630 ntBASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv8-28A0A0G2JE47 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv8-28A0A0G2JE47 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms