Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 MIR4497-201ENST00000583208 89 ntBASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 AC069544.1-201ENST00000609399 999 ntBASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 CYP21A1P-202ENST00000354927 1481 ntBASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC187A0A096LP49 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 AC105020.6-201ENST00000621523 1217 ntBASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 AC133561.1-201ENST00000568600 2415 ntBASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC187A0A096LP49 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 AC026471.6-201ENST00000622954 1905 ntBASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 AC233263.1-201ENST00000578059 224 ntBASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 AC068473.5-201ENST00000616428 2072 ntBASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC187A0A096LP49 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 AC010542.4-201ENST00000563151 1910 ntBASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 POM121L13P-201ENST00000422362 380 ntBASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC187A0A096LP49 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms