Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PYHIN1-205ENST00000392254 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 PKMP5-201ENST00000454707 1601 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 F11-202ENST00000264692 1916 ntTSL 2 BASIC10.25□□□□□ -0.77
SLC1A1P43005 BZW2-202ENST00000405202 1689 ntTSL 5 BASIC10.25□□□□□ -0.77
SLC1A1P43005 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC10.25□□□□□ -0.77
SLC1A1P43005 WDR93-205ENST00000560294 2293 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
SLC1A1P43005 CYP24A1-202ENST00000395954 1438 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 DMP1-201ENST00000282479 2634 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 RASGRP3-201ENST00000402538 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 DPH6-201ENST00000256538 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 STEAP3-201ENST00000393106 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 FAM180A-201ENST00000338588 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 LINC01012-204ENST00000629732 2771 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC10.24□□□□□ -0.77
SLC1A1P43005 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SLC1A1P43005 PPY-201ENST00000225992 460 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 VAMP8-201ENST00000263864 774 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 SIRPG-203ENST00000344103 1042 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 SLAMF8-202ENST00000368104 1038 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
SLC1A1P43005 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC10.24□□□□□ -0.77
SLC1A1P43005 AL137792.1-201ENST00000399029 557 ntBASIC10.24□□□□□ -0.77
SLC1A1P43005 AP000529.1-201ENST00000417657 1123 ntBASIC10.24□□□□□ -0.77
SLC1A1P43005 AL671883.1-201ENST00000421191 306 ntBASIC10.24□□□□□ -0.77
SLC1A1P43005 TGFA-IT1-201ENST00000441238 436 ntTSL 5 BASIC10.24□□□□□ -0.77
SLC1A1P43005 ATP5J2LP-201ENST00000444161 235 ntBASIC10.24□□□□□ -0.77
SLC1A1P43005 FDPSP2-201ENST00000453932 897 ntBASIC10.24□□□□□ -0.77
SLC1A1P43005 RPL36P4-201ENST00000456725 318 ntBASIC10.24□□□□□ -0.77
SLC1A1P43005 C6orf52-204ENST00000460742 541 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SLC1A1P43005 DUBR-203ENST00000473550 738 ntTSL 3 BASIC10.24□□□□□ -0.77
SLC1A1P43005 SPRY4-AS1-204ENST00000510311 591 ntTSL 4 BASIC10.24□□□□□ -0.77
SLC1A1P43005 AC079360.1-201ENST00000543848 434 ntTSL 3 BASIC10.24□□□□□ -0.77
SLC1A1P43005 VPS4B-207ENST00000591519 551 ntTSL 2 BASIC10.24□□□□□ -0.77
SLC1A1P43005 AC092127.2-201ENST00000602862 601 ntTSL 3 BASIC10.24□□□□□ -0.77
SLC1A1P43005 WISP3-208ENST00000604763 1250 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SLC1A1P43005 CCL4L2-210ENST00000610565 785 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 AC236972.3-202ENST00000620734 1222 ntTSL 3 BASIC10.24□□□□□ -0.77
SLC1A1P43005 AL162390.1-201ENST00000622201 1246 ntBASIC10.24□□□□□ -0.77
SLC1A1P43005 ILK-216ENST00000627400 111 ntTSL 5 BASIC10.24□□□□□ -0.77
SLC1A1P43005 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
SLC1A1P43005 GNPDA1-201ENST00000311337 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 AC008507.5-201ENST00000624591 1969 ntBASIC10.24□□□□□ -0.77
SLC1A1P43005 AC004381.2-201ENST00000637768 1329 ntBASIC10.24□□□□□ -0.77
SLC1A1P43005 AKR1D1-201ENST00000242375 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
SLC1A1P43005 AK3-204ENST00000611749 4029 ntTSL 4 BASIC10.24□□□□□ -0.77
SLC1A1P43005 HPS5-203ENST00000396253 4725 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 DNAJC16-203ENST00000375849 3446 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 AC020558.3-201ENST00000623335 1703 ntBASIC10.24□□□□□ -0.77
SLC1A1P43005 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC10.24□□□□□ -0.77
SLC1A1P43005 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SLC1A1P43005 PRSS51-204ENST00000637190 2149 ntTSL 5 BASIC10.24□□□□□ -0.77
SLC1A1P43005 NIPSNAP3B-201ENST00000374762 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 CASP8-201ENST00000264274 2540 ntTSL 5 BASIC10.24□□□□□ -0.77
SLC1A1P43005 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SLC1A1P43005 PRKCH-211ENST00000555082 2932 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 AC026358.1-201ENST00000539391 2256 ntTSL 3 BASIC10.23□□□□□ -0.77
SLC1A1P43005 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC10.23□□□□□ -0.77
SLC1A1P43005 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
SLC1A1P43005 PCDH11Y-202ENST00000333703 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 SP1-201ENST00000327443 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 UTS2-203ENST00000377516 1601 ntTSL 5 BASIC10.23□□□□□ -0.77
SLC1A1P43005 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 ADCY10P1-202ENST00000457653 3785 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 CINP-201ENST00000216756 955 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 MND1-201ENST00000240488 968 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 CCL27-201ENST00000259631 446 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 OR52N2-201ENST00000317037 1035 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
SLC1A1P43005 SH2D1A-201ENST00000360027 593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 BORCS7-202ENST00000369883 838 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 AC004951.2-201ENST00000420754 789 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 MT1XP1-201ENST00000421314 186 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 LINC00864-201ENST00000429129 746 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 CASP12-205ENST00000441710 1168 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 RPE-214ENST00000452025 779 ntTSL 3 BASIC10.23□□□□□ -0.77
SLC1A1P43005 AF003529.1-201ENST00000455649 644 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 AL161785.1-201ENST00000455981 583 ntTSL 2 BASIC10.23□□□□□ -0.77
SLC1A1P43005 AC022294.1-201ENST00000460993 865 ntTSL 3 BASIC10.23□□□□□ -0.77
SLC1A1P43005 RPSAP55-201ENST00000477347 876 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 RACK1-233ENST00000514455 791 ntTSL 2 BASIC10.23□□□□□ -0.77
SLC1A1P43005 HNRNPH1P3-201ENST00000515565 1225 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 AC120042.1-201ENST00000524309 550 ntTSL 5 BASIC10.23□□□□□ -0.77
SLC1A1P43005 HNRNPA1P76-201ENST00000529475 848 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 CINP-203ENST00000541568 572 ntTSL 5 BASIC10.23□□□□□ -0.77
SLC1A1P43005 C14orf2-210ENST00000555030 749 ntTSL 3 BASIC10.23□□□□□ -0.77
SLC1A1P43005 U91319.1-201ENST00000571619 764 ntTSL 3 BASIC10.23□□□□□ -0.77
SLC1A1P43005 BRCA1-227ENST00000591849 563 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SLC1A1P43005 AC117498.3-201ENST00000605409 511 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 AP000435.2-201ENST00000610280 940 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 AC116348.4-201ENST00000624127 348 ntBASIC10.23□□□□□ -0.77
SLC1A1P43005 AC068631.1-208ENST00000626649 667 ntTSL 5 BASIC10.23□□□□□ -0.77
SLC1A1P43005 AC068631.1-207ENST00000630315 821 ntTSL 5 BASIC10.23□□□□□ -0.77
SLC1A1P43005 DMGDH-201ENST00000255189 3106 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms