Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 AL353708.3-201ENST00000610272 989 ntBASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARFGEF1Q9Y6D6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 AC245052.3-201ENST00000450182 901 ntBASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ARFGEF1Q9Y6D6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 ANOS2P-203ENST00000472227 1816 ntBASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARFGEF1Q9Y6D6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARFGEF1Q9Y6D6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 AL023875.1-201ENST00000640777 796 ntBASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 KRASP1-201ENST00000407852 552 ntBASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARFGEF1Q9Y6D6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 KRT18P68-201ENST00000392293 1000 ntBASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 AL049597.2-201ENST00000565575 961 ntBASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 AC110285.5-201ENST00000611501 352 ntBASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 AC092865.7-201ENST00000641832 219 ntBASIC25.64■■□□□ 1.7
ARFGEF1Q9Y6D6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ARFGEF1Q9Y6D6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ARFGEF1Q9Y6D6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ARFGEF1Q9Y6D6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ARFGEF1Q9Y6D6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ARFGEF1Q9Y6D6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms