Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CTDP1Q9Y5B0 AC091874.3-201ENST00000512672 1195 ntBASIC24.04■■□□□ 1.44
CTDP1Q9Y5B0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.04■■□□□ 1.44
CTDP1Q9Y5B0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CTDP1Q9Y5B0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CTDP1Q9Y5B0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.04■■□□□ 1.44
CTDP1Q9Y5B0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CTDP1Q9Y5B0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTDP1Q9Y5B0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 POU5F1P3-201ENST00000428824 1078 ntBASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTDP1Q9Y5B0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 KRT18P29-201ENST00000397031 1267 ntBASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 AL355472.2-201ENST00000422958 438 ntBASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 AC083880.1-201ENST00000608266 535 ntBASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 AIRN-201ENST00000601203 4374 ntBASIC24.01■■□□□ 1.43
CTDP1Q9Y5B0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 AC007322.3-201ENST00000426526 701 ntBASIC24■■□□□ 1.43
CTDP1Q9Y5B0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 AC233723.2-201ENST00000623798 2106 ntBASIC24■■□□□ 1.43
CTDP1Q9Y5B0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24■■□□□ 1.43
CTDP1Q9Y5B0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 MYC-209ENST00000641252 345 ntBASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 GUSBP5-202ENST00000510805 1989 ntBASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTDP1Q9Y5B0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 AC100791.3-201ENST00000617619 330 ntBASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CTDP1Q9Y5B0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 495 ms