Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 AC005181.1-201ENST00000604782 1256 ntBASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDH20Q8N6Y1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 ID1-201ENST00000376105 1233 ntBASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDH20Q8N6Y1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PCDH20Q8N6Y1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 AC245052.3-201ENST00000450182 901 ntBASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 AL050303.2-201ENST00000619798 666 ntBASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH20Q8N6Y1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 NCF1B-203ENST00000435988 1254 ntBASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 AC068338.2-201ENST00000563278 1430 ntBASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH20Q8N6Y1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms