Protein–RNA interactions for Protein: P47013

LCB3, Dihydrosphingosine 1-phosphate phosphatase LCB3, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB3P47013 YNL203CYNL203C 612 nt2.51□□□□□ -2.01
LCB3P47013 YAP7YOL028C 738 nt2.51□□□□□ -2.01
LCB3P47013 BUD21YOR078W 645 nt2.51□□□□□ -2.01
LCB3P47013 DUF1YOL087C 3351 nt2.5□□□□□ -2.01
LCB3P47013 YNL193WYNL193W 1677 nt2.5□□□□□ -2.01
LCB3P47013 VPS30YPL120W 1674 nt2.5□□□□□ -2.01
LCB3P47013 FAR7YFR008W 666 nt2.5□□□□□ -2.01
LCB3P47013 YGR017WYGR017W 894 nt2.5□□□□□ -2.01
LCB3P47013 MTM1YGR257C 1101 nt2.5□□□□□ -2.01
LCB3P47013 PHD1YKL043W 1101 nt2.5□□□□□ -2.01
LCB3P47013 YLR230WYLR230W 306 nt2.5□□□□□ -2.01
LCB3P47013 CWC24YLR323C 780 nt2.5□□□□□ -2.01
LCB3P47013 VMA6YLR447C 1038 nt2.5□□□□□ -2.01
LCB3P47013 MRPL16YBL038W 699 nt2.5□□□□□ -2.01
LCB3P47013 YMR254CYMR254C 309 nt2.5□□□□□ -2.01
LCB3P47013 TGL3YMR313C 1929 nt2.5□□□□□ -2.01
LCB3P47013 MAL33YBR297W 1407 nt2.5□□□□□ -2.01
LCB3P47013 EPL1YFL024C 2499 nt2.49□□□□□ -2.01
LCB3P47013 VAS1YGR094W 3315 nt2.49□□□□□ -2.01
LCB3P47013 PUF6YDR496C 1971 nt2.49□□□□□ -2.01
LCB3P47013 UTP15YMR093W 1542 nt2.49□□□□□ -2.01
LCB3P47013 MED1YPR070W 1701 nt2.49□□□□□ -2.01
LCB3P47013 ARK1YNL020C 1917 nt2.49□□□□□ -2.01
LCB3P47013 YDR018CYDR018C 1191 nt2.49□□□□□ -2.01
LCB3P47013 YDR133CYDR133C 336 nt2.49□□□□□ -2.01
LCB3P47013 TDA2YER071C 381 nt2.49□□□□□ -2.01
LCB3P47013 YKL023C-AYKL023C-A 228 nt2.49□□□□□ -2.01
LCB3P47013 YMR122W-AYMR122W-A 255 nt2.49□□□□□ -2.01
LCB3P47013 NGL1YOL042W 1092 nt2.49□□□□□ -2.01
LCB3P47013 PCK1YKR097W 1650 nt2.49□□□□□ -2.01
LCB3P47013 NEL1YHR035W 1893 nt2.49□□□□□ -2.01
LCB3P47013 SNQ2YDR011W 4506 nt2.49□□□□□ -2.01
LCB3P47013 SWC4YGR002C 1431 nt2.49□□□□□ -2.01
LCB3P47013 YKL100CYKL100C 1764 nt2.49□□□□□ -2.01
LCB3P47013 RPN3YER021W 1572 nt2.49□□□□□ -2.01
LCB3P47013 RIX1YHR197W 2292 nt2.48□□□□□ -2.01
LCB3P47013 PCI8YIL071C 1335 nt2.48□□□□□ -2.01
LCB3P47013 SCY1YGL083W 2415 nt2.48□□□□□ -2.01
LCB3P47013 NCS2YNL119W 1482 nt2.48□□□□□ -2.01
LCB3P47013 YDR115WYDR115W 318 nt2.48□□□□□ -2.01
LCB3P47013 YER091C-AYER091C-A 222 nt2.48□□□□□ -2.01
LCB3P47013 EMC4YGL231C 573 nt2.48□□□□□ -2.01
LCB3P47013 YGR053CYGR053C 852 nt2.48□□□□□ -2.01
LCB3P47013 YJL086CYJL086C 369 nt2.48□□□□□ -2.01
LCB3P47013 YJL119CYJL119C 324 nt2.48□□□□□ -2.01
LCB3P47013 MCR1YKL150W 909 nt2.48□□□□□ -2.01
LCB3P47013 NIP7YPL211W 546 nt2.48□□□□□ -2.01
LCB3P47013 MET5YJR137C 4329 nt2.48□□□□□ -2.01
LCB3P47013 YDR210W-BYDR210W-B 5313 nt2.48□□□□□ -2.01
LCB3P47013 YDR261W-BYDR261W-B 5313 nt2.48□□□□□ -2.01
LCB3P47013 YFL002W-AYFL002W-A 5313 nt2.48□□□□□ -2.01
LCB3P47013 YGR161W-BYGR161W-B 5313 nt2.48□□□□□ -2.01
LCB3P47013 YLR410W-BYLR410W-B 5313 nt2.48□□□□□ -2.01
LCB3P47013 SLP1YOR154W 1764 nt2.48□□□□□ -2.01
LCB3P47013 YCL019WYCL019W 5313 nt2.48□□□□□ -2.01
LCB3P47013 MET10YFR030W 3108 nt2.48□□□□□ -2.01
LCB3P47013 LRG1YDL240W 3054 nt2.48□□□□□ -2.01
LCB3P47013 CHS2YBR038W 2892 nt2.47□□□□□ -2.01
LCB3P47013 TMA64YDR117C 1698 nt2.47□□□□□ -2.01
LCB3P47013 RAX2YLR084C 3663 nt2.47□□□□□ -2.01
LCB3P47013 TFB1YDR311W 1929 nt2.47□□□□□ -2.01
LCB3P47013 OPI6YDL096C 327 nt2.47□□□□□ -2.01
LCB3P47013 YIR036W-AYIR036W-A 402 nt2.47□□□□□ -2.01
LCB3P47013 ACF4YJR083C 930 nt2.47□□□□□ -2.01
LCB3P47013 CDC123YLR215C 1083 nt2.47□□□□□ -2.01
LCB3P47013 COX8YLR395C 237 nt2.47□□□□□ -2.01
LCB3P47013 GMC2YLR445W 567 nt2.47□□□□□ -2.01
LCB3P47013 ATP18YML081C-A 180 nt2.47□□□□□ -2.01
LCB3P47013 YMR181CYMR181C 465 nt2.47□□□□□ -2.01
LCB3P47013 PIS1YPR113W 663 nt2.47□□□□□ -2.01
LCB3P47013 LOA1YPR139C 903 nt2.47□□□□□ -2.01
LCB3P47013 MRS2YOR334W 1413 nt2.47□□□□□ -2.01
LCB3P47013 CHO2YGR157W 2610 nt2.47□□□□□ -2.01
LCB3P47013 VHR2YER064C 1518 nt2.47□□□□□ -2.01
LCB3P47013 DSF2YBR007C 2211 nt2.46□□□□□ -2.01
LCB3P47013 YTA7YGR270W 4140 nt2.46□□□□□ -2.02
LCB3P47013 SSP1YHR184W 1716 nt2.46□□□□□ -2.02
LCB3P47013 AKR1YDR264C 2295 nt2.46□□□□□ -2.02
LCB3P47013 snR59snR59 78 nt2.46□□□□□ -2.02
LCB3P47013 YCR090CYCR090C 549 nt2.46□□□□□ -2.02
LCB3P47013 NCB2YDR397C 441 nt2.46□□□□□ -2.02
LCB3P47013 SLX9YGR081C 633 nt2.46□□□□□ -2.02
LCB3P47013 LRP1YHR081W 555 nt2.46□□□□□ -2.02
LCB3P47013 CPR7YJR032W 1182 nt2.46□□□□□ -2.02
LCB3P47013 YNL043CYNL043C 321 nt2.46□□□□□ -2.02
LCB3P47013 SFM1YOR021C 642 nt2.46□□□□□ -2.02
LCB3P47013 TPK2YPL203W 1143 nt2.46□□□□□ -2.02
LCB3P47013 DBF20YPR111W 1695 nt2.46□□□□□ -2.02
LCB3P47013 YHR080CYHR080C 4038 nt2.46□□□□□ -2.02
LCB3P47013 KAR9YPL269W 1935 nt2.46□□□□□ -2.02
LCB3P47013 BIT61YJL058C 1632 nt2.46□□□□□ -2.02
LCB3P47013 FAA2YER015W 2235 nt2.45□□□□□ -2.02
LCB3P47013 YDR029WYDR029W 315 nt2.45□□□□□ -2.02
LCB3P47013 PEA2YER149C 1263 nt2.45□□□□□ -2.02
LCB3P47013 tK(UUU)DtK(UUU)D 73 nt2.45□□□□□ -2.02
LCB3P47013 tK(UUU)G1tK(UUU)G1 73 nt2.45□□□□□ -2.02
LCB3P47013 tK(UUU)G2tK(UUU)G2 73 nt2.45□□□□□ -2.02
LCB3P47013 tK(UUU)KtK(UUU)K 73 nt2.45□□□□□ -2.02
LCB3P47013 tK(UUU)LtK(UUU)L 73 nt2.45□□□□□ -2.02
LCB3P47013 tK(UUU)OtK(UUU)O 73 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 20.7 ms