Protein–RNA interactions for Protein: P40079

LCP5, U3 small nucleolar ribonucleoprotein protein LCP5, yeastyeast

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCP5P40079 RMD6YEL072W 696 nt2.64□□□□□ -1.99
LCP5P40079 tW(CCA)G1tW(CCA)G1 72 nt2.64□□□□□ -1.99
LCP5P40079 tW(CCA)G2tW(CCA)G2 72 nt2.64□□□□□ -1.99
LCP5P40079 tW(CCA)JtW(CCA)J 72 nt2.64□□□□□ -1.99
LCP5P40079 tW(CCA)KtW(CCA)K 72 nt2.64□□□□□ -1.99
LCP5P40079 SEC28YIL076W 891 nt2.64□□□□□ -1.99
LCP5P40079 tW(CCA)MtW(CCA)M 72 nt2.64□□□□□ -1.99
LCP5P40079 tW(CCA)PtW(CCA)P 72 nt2.64□□□□□ -1.99
LCP5P40079 NDL1YLR254C 570 nt2.64□□□□□ -1.99
LCP5P40079 RPS12YOR369C 432 nt2.64□□□□□ -1.99
LCP5P40079 CIN2YPL241C 807 nt2.64□□□□□ -1.99
LCP5P40079 BIT61YJL058C 1632 nt2.64□□□□□ -1.99
LCP5P40079 ARK1YNL020C 1917 nt2.64□□□□□ -1.99
LCP5P40079 YNL193WYNL193W 1677 nt2.63□□□□□ -1.99
LCP5P40079 SUI2YJR007W 915 nt2.63□□□□□ -1.99
LCP5P40079 YLR050CYLR050C 486 nt2.63□□□□□ -1.99
LCP5P40079 INP1YMR204C 1263 nt2.63□□□□□ -1.99
LCP5P40079 RPL20AYMR242C 519 nt2.63□□□□□ -1.99
LCP5P40079 YOL019W-AYOL019W-A 153 nt2.63□□□□□ -1.99
LCP5P40079 JJJ2YJL162C 1752 nt2.62□□□□□ -1.99
LCP5P40079 YIL054WYIL054W 318 nt2.62□□□□□ -1.99
LCP5P40079 GPI14YJR013W 1212 nt2.62□□□□□ -1.99
LCP5P40079 YLR307C-AYLR307C-A 264 nt2.62□□□□□ -1.99
LCP5P40079 YOR050CYOR050C 348 nt2.62□□□□□ -1.99
LCP5P40079 YPR027CYPR027C 834 nt2.62□□□□□ -1.99
LCP5P40079 DSE4YNR067C 3354 nt2.61□□□□□ -1.99
LCP5P40079 SRB4YER022W 2064 nt2.61□□□□□ -1.99
LCP5P40079 JIP5YPR169W 1479 nt2.61□□□□□ -1.99
LCP5P40079 SRD1YCR018C 666 nt2.61□□□□□ -1.99
LCP5P40079 BTN2YGR142W 1233 nt2.61□□□□□ -1.99
LCP5P40079 BAT1YHR208W 1182 nt2.61□□□□□ -1.99
LCP5P40079 YHR213WYHR213W 597 nt2.61□□□□□ -1.99
LCP5P40079 YJL047C-AYJL047C-A 135 nt2.61□□□□□ -1.99
LCP5P40079 TPK3YKL166C 1197 nt2.61□□□□□ -1.99
LCP5P40079 YAR062WYAR062W 597 nt2.61□□□□□ -1.99
LCP5P40079 REC102YLR329W 795 nt2.61□□□□□ -1.99
LCP5P40079 AIM36YMR157C 768 nt2.61□□□□□ -1.99
LCP5P40079 IPP1YBR011C 864 nt2.61□□□□□ -1.99
LCP5P40079 LCL1YPL056C 306 nt2.61□□□□□ -1.99
LCP5P40079 YPL142CYPL142C 318 nt2.61□□□□□ -1.99
LCP5P40079 RRD2YPL152W 1077 nt2.61□□□□□ -1.99
LCP5P40079 ARL1YBR164C 552 nt2.61□□□□□ -1.99
LCP5P40079 ATP16YDL004W 483 nt2.6□□□□□ -1.99
LCP5P40079 SLU7YDR088C 1149 nt2.6□□□□□ -1.99
LCP5P40079 RSR1YGR152C 819 nt2.6□□□□□ -1.99
LCP5P40079 RPL27AYHR010W 411 nt2.6□□□□□ -1.99
LCP5P40079 SDO1YLR022C 753 nt2.6□□□□□ -1.99
LCP5P40079 SMD2YLR275W 333 nt2.6□□□□□ -1.99
LCP5P40079 YMR181CYMR181C 465 nt2.6□□□□□ -1.99
LCP5P40079 YSF3YNL138W-A 258 nt2.6□□□□□ -1.99
LCP5P40079 GRE2YOL151W 1029 nt2.6□□□□□ -1.99
LCP5P40079 RRP15YPR143W 753 nt2.6□□□□□ -1.99
LCP5P40079 NTC20YBR188C 423 nt2.6□□□□□ -1.99
LCP5P40079 YBR209WYBR209W 318 nt2.6□□□□□ -1.99
LCP5P40079 ERT1YBR239C 1590 nt2.6□□□□□ -1.99
LCP5P40079 RGR1YLR071C 3249 nt2.6□□□□□ -1.99
LCP5P40079 TFB1YDR311W 1929 nt2.6□□□□□ -1.99
LCP5P40079 PSK1YAL017W 4071 nt2.59□□□□□ -1.99
LCP5P40079 STE11YLR362W 2154 nt2.59□□□□□ -1.99
LCP5P40079 KEI1YDR367W 666 nt2.59□□□□□ -1.99
LCP5P40079 YIL156W-BYIL156W-B 222 nt2.59□□□□□ -1.99
LCP5P40079 SFT1YKL006C-A 294 nt2.59□□□□□ -1.99
LCP5P40079 YPR203WYPR203W 309 nt2.59□□□□□ -1.99
LCP5P40079 PSY2YNL201C 2577 nt2.59□□□□□ -1.99
LCP5P40079 FUS2YMR232W 2034 nt2.59□□□□□ -2
LCP5P40079 SWC4YGR002C 1431 nt2.59□□□□□ -2
LCP5P40079 SLN1YIL147C 3663 nt2.58□□□□□ -2
LCP5P40079 BRE5YNR051C 1548 nt2.58□□□□□ -2
LCP5P40079 VPS30YPL120W 1674 nt2.58□□□□□ -2
LCP5P40079 FIN1YDR130C 876 nt2.58□□□□□ -2
LCP5P40079 PRE1YER012W 597 nt2.58□□□□□ -2
LCP5P40079 LIP2YLR239C 987 nt2.58□□□□□ -2
LCP5P40079 ATP11YNL315C 957 nt2.58□□□□□ -2
LCP5P40079 CSI2YOL007C 1026 nt2.58□□□□□ -2
LCP5P40079 NGL1YOL042W 1092 nt2.58□□□□□ -2
LCP5P40079 RRG7YOR305W 729 nt2.58□□□□□ -2
LCP5P40079 YBL005W-BYBL005W-B 5268 nt2.58□□□□□ -2
LCP5P40079 JSN1YJR091C 3276 nt2.58□□□□□ -2
LCP5P40079 NUM1YDR150W 8247 nt2.57□□□□□ -2
LCP5P40079 MET6YER091C 2304 nt2.57□□□□□ -2
LCP5P40079 RAV2YDR202C 1056 nt2.57□□□□□ -2
LCP5P40079 PDS5YMR076C 3834 nt2.56□□□□□ -2
LCP5P40079 ASI3YNL008C 2031 nt2.56□□□□□ -2
LCP5P40079 SLK19YOR195W 2466 nt2.56□□□□□ -2
LCP5P40079 RPC25YKL144C 639 nt2.56□□□□□ -2
LCP5P40079 BET3YKR068C 582 nt2.56□□□□□ -2
LCP5P40079 YLL044WYLL044W 447 nt2.56□□□□□ -2
LCP5P40079 YLR154W-EYLR154W-E 204 nt2.56□□□□□ -2
LCP5P40079 YLR217WYLR217W 324 nt2.56□□□□□ -2
LCP5P40079 YLR257WYLR257W 966 nt2.56□□□□□ -2
LCP5P40079 ATX1YNL259C 222 nt2.56□□□□□ -2
LCP5P40079 BNR1YIL159W 4128 nt2.56□□□□□ -2
LCP5P40079 YDR262WYDR262W 819 nt2.55□□□□□ -2
LCP5P40079 YKR078WYKR078W 1758 nt2.55□□□□□ -2
LCP5P40079 ADY4YLR227C 1482 nt2.55□□□□□ -2
LCP5P40079 SVL3YPL032C 2478 nt2.55□□□□□ -2
LCP5P40079 SWR1YDR334W 4545 nt2.55□□□□□ -2
LCP5P40079 PHO91YNR013C 2685 nt2.55□□□□□ -2
LCP5P40079 SKT5YBL061C 2091 nt2.54□□□□□ -2
LCP5P40079 UTP15YMR093W 1542 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms