Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YER068C-AYER068C-A 432 nt1.54□□□□□ -2.16
CDC39P25655 SAE2YGL175C 1038 nt1.54□□□□□ -2.16
CDC39P25655 YLR169WYLR169W 354 nt1.54□□□□□ -2.16
CDC39P25655 MFA2YNL145W 117 nt1.54□□□□□ -2.16
CDC39P25655 TRM7YBR061C 933 nt1.54□□□□□ -2.16
CDC39P25655 UBX3YDL091C 1368 nt1.54□□□□□ -2.16
CDC39P25655 SLY41YOR307C 1362 nt1.54□□□□□ -2.16
CDC39P25655 IRC10YOL015W 1761 nt1.54□□□□□ -2.16
CDC39P25655 YEL018C-AYEL018C-A 534 nt1.54□□□□□ -2.16
CDC39P25655 TAN1YGL232W 870 nt1.54□□□□□ -2.16
CDC39P25655 RSR1YGR152C 819 nt1.54□□□□□ -2.16
CDC39P25655 YHL037CYHL037C 402 nt1.54□□□□□ -2.16
CDC39P25655 RPS1AYLR441C 768 nt1.54□□□□□ -2.16
CDC39P25655 PML39YML107C 1005 nt1.54□□□□□ -2.16
CDC39P25655 VPS38YLR360W 1320 nt1.54□□□□□ -2.16
CDC39P25655 YCT1YLL055W 1596 nt1.53□□□□□ -2.16
CDC39P25655 BIT61YJL058C 1632 nt1.53□□□□□ -2.16
CDC39P25655 YJL016WYJL016W 1686 nt1.53□□□□□ -2.16
CDC39P25655 ERP3YDL018C 678 nt1.53□□□□□ -2.16
CDC39P25655 YRB1YDR002W 606 nt1.53□□□□□ -2.16
CDC39P25655 IZH1YDR492W 951 nt1.53□□□□□ -2.16
CDC39P25655 NOP19YGR251W 591 nt1.53□□□□□ -2.16
CDC39P25655 MRPL38YKL170W 417 nt1.53□□□□□ -2.16
CDC39P25655 YMR320WYMR320W 306 nt1.53□□□□□ -2.16
CDC39P25655 YNL067W-AYNL067W-A 147 nt1.53□□□□□ -2.16
CDC39P25655 TPT1YOL102C 693 nt1.53□□□□□ -2.16
CDC39P25655 SEN54YPL083C 1404 nt1.53□□□□□ -2.16
CDC39P25655 VPS34YLR240W 2628 nt1.52□□□□□ -2.17
CDC39P25655 GUK1YDR454C 564 nt1.52□□□□□ -2.17
CDC39P25655 MPO1YGL010W 525 nt1.52□□□□□ -2.17
CDC39P25655 YGR064WYGR064W 369 nt1.52□□□□□ -2.17
CDC39P25655 MRP49YKL167C 414 nt1.52□□□□□ -2.17
CDC39P25655 COA6YMR244C-A 315 nt1.52□□□□□ -2.17
CDC39P25655 YKR015CYKR015C 1707 nt1.52□□□□□ -2.17
CDC39P25655 STN1YDR082W 1485 nt1.52□□□□□ -2.17
CDC39P25655 YDR179W-AYDR179W-A 1392 nt1.52□□□□□ -2.17
CDC39P25655 NUF2YOL069W 1356 nt1.52□□□□□ -2.17
CDC39P25655 YJL070CYJL070C 2667 nt1.52□□□□□ -2.17
CDC39P25655 snR83snR83 306 nt1.52□□□□□ -2.17
CDC39P25655 DUO1YGL061C 744 nt1.52□□□□□ -2.17
CDC39P25655 RPS25AYGR027C 327 nt1.52□□□□□ -2.17
CDC39P25655 YGR219WYGR219W 342 nt1.52□□□□□ -2.17
CDC39P25655 YHR097CYHR097C 1101 nt1.52□□□□□ -2.17
CDC39P25655 RGI2YIL057C 495 nt1.52□□□□□ -2.17
CDC39P25655 RPA12YJR063W 378 nt1.52□□□□□ -2.17
CDC39P25655 LRE1YCL051W 1752 nt1.52□□□□□ -2.17
CDC39P25655 PIK1YNL267W 3201 nt1.51□□□□□ -2.17
CDC39P25655 LYS9YNR050C 1341 nt1.51□□□□□ -2.17
CDC39P25655 YER066C-AYER066C-A 501 nt1.51□□□□□ -2.17
CDC39P25655 COG2YGR120C 789 nt1.51□□□□□ -2.17
CDC39P25655 YHR182C-AYHR182C-A 474 nt1.51□□□□□ -2.17
CDC39P25655 DCG1YIR030C 735 nt1.51□□□□□ -2.17
CDC39P25655 YML047W-AYML047W-A 366 nt1.51□□□□□ -2.17
CDC39P25655 PDR17YNL264C 1053 nt1.51□□□□□ -2.17
CDC39P25655 UAF30YOR295W 687 nt1.51□□□□□ -2.17
CDC39P25655 YPL142CYPL142C 318 nt1.51□□□□□ -2.17
CDC39P25655 PCK1YKR097W 1650 nt1.51□□□□□ -2.17
CDC39P25655 DIS3YOL021C 3006 nt1.51□□□□□ -2.17
CDC39P25655 YKL156C-AYKL156C-A 117 nt1.51□□□□□ -2.17
CDC39P25655 RLP24YLR009W 600 nt1.51□□□□□ -2.17
CDC39P25655 YMR099CYMR099C 894 nt1.51□□□□□ -2.17
CDC39P25655 COQ10YOL008W 624 nt1.51□□□□□ -2.17
CDC39P25655 YPL071CYPL071C 471 nt1.51□□□□□ -2.17
CDC39P25655 CTP1YBR291C 900 nt1.51□□□□□ -2.17
CDC39P25655 POL4YCR014C 1749 nt1.5□□□□□ -2.17
CDC39P25655 SYO1YDL063C 1863 nt1.5□□□□□ -2.17
CDC39P25655 SEC4YFL005W 648 nt1.5□□□□□ -2.17
CDC39P25655 TWF1YGR080W 999 nt1.5□□□□□ -2.17
CDC39P25655 YHL006W-AYHL006W-A 354 nt1.5□□□□□ -2.17
CDC39P25655 PET191YJR034W 327 nt1.5□□□□□ -2.17
CDC39P25655 THI80YOR143C 960 nt1.5□□□□□ -2.17
CDC39P25655 RPS10AYOR293W 318 nt1.5□□□□□ -2.17
CDC39P25655 YOR392WYOR392W 444 nt1.5□□□□□ -2.17
CDC39P25655 YPR147CYPR147C 915 nt1.5□□□□□ -2.17
CDC39P25655 MBA1YBR185C 837 nt1.5□□□□□ -2.17
CDC39P25655 YCL001W-AYCL001W-A 462 nt1.5□□□□□ -2.17
CDC39P25655 MES1YGR264C 2256 nt1.5□□□□□ -2.17
CDC39P25655 HOP1YIL072W 1818 nt1.5□□□□□ -2.17
CDC39P25655 FMN1YDR236C 657 nt1.49□□□□□ -2.17
CDC39P25655 MDM10YAL010C 1482 nt1.49□□□□□ -2.17
CDC39P25655 REV1YOR346W 2958 nt1.49□□□□□ -2.17
CDC39P25655 HER1YOR227W 3741 nt1.49□□□□□ -2.17
CDC39P25655 SEC16YPL085W 6588 nt1.49□□□□□ -2.17
CDC39P25655 TFB1YDR311W 1929 nt1.49□□□□□ -2.17
CDC39P25655 CTF4YPR135W 2784 nt1.49□□□□□ -2.17
CDC39P25655 NEO1YIL048W 3456 nt1.49□□□□□ -2.17
CDC39P25655 JJJ2YJL162C 1752 nt1.49□□□□□ -2.17
CDC39P25655 TRM3YDL112W 4311 nt1.49□□□□□ -2.17
CDC39P25655 YLR108CYLR108C 1458 nt1.48□□□□□ -2.17
CDC39P25655 MRP10YDL045W-A 288 nt1.48□□□□□ -2.17
CDC39P25655 TIM11YDR322C-A 291 nt1.48□□□□□ -2.17
CDC39P25655 IRC6YFR043C 714 nt1.48□□□□□ -2.17
CDC39P25655 TDA10YGR205W 873 nt1.48□□□□□ -2.17
CDC39P25655 HUG1YML058W-A 207 nt1.48□□□□□ -2.17
CDC39P25655 DSE3YOR264W 1293 nt1.48□□□□□ -2.17
CDC39P25655 SFB2YNL049C 2631 nt1.48□□□□□ -2.17
CDC39P25655 SWR1YDR334W 4545 nt1.48□□□□□ -2.17
CDC39P25655 MCT1YOR221C 1083 nt1.48□□□□□ -2.17
CDC39P25655 SRL1YOR247W 633 nt1.48□□□□□ -2.17
CDC39P25655 LTP1YPR073C 486 nt1.48□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 33.5 ms