Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
CSB-PGBD3P0DP91 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC27.7■■■□□ 2.03
CSB-PGBD3P0DP91 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.7■■■□□ 2.03
CSB-PGBD3P0DP91 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CSB-PGBD3P0DP91 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CSB-PGBD3P0DP91 PTPA-214ENST00000423100 988 ntTSL 2 BASIC27.7■■■□□ 2.02
CSB-PGBD3P0DP91 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC27.7■■■□□ 2.02
CSB-PGBD3P0DP91 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CSB-PGBD3P0DP91 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CSB-PGBD3P0DP91 AC010542.4-201ENST00000563151 1910 ntBASIC27.7■■■□□ 2.02
CSB-PGBD3P0DP91 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CSB-PGBD3P0DP91 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC27.7■■■□□ 2.02
CSB-PGBD3P0DP91 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC27.69■■■□□ 2.02
CSB-PGBD3P0DP91 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CSB-PGBD3P0DP91 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CSB-PGBD3P0DP91 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CSB-PGBD3P0DP91 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CSB-PGBD3P0DP91 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC27.69■■■□□ 2.02
CSB-PGBD3P0DP91 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC27.69■■■□□ 2.02
CSB-PGBD3P0DP91 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
CSB-PGBD3P0DP91 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CSB-PGBD3P0DP91 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC27.69■■■□□ 2.02
CSB-PGBD3P0DP91 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 CYP21A1P-202ENST00000354927 1481 ntBASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CSB-PGBD3P0DP91 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CSB-PGBD3P0DP91 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 POM121L13P-201ENST00000422362 380 ntBASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 REXO1L12P-201ENST00000622156 912 ntBASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
CSB-PGBD3P0DP91 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CSB-PGBD3P0DP91 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
CSB-PGBD3P0DP91 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CSB-PGBD3P0DP91 AC211429.1-201ENST00000415277 523 ntBASIC27.65■■■□□ 2.02
CSB-PGBD3P0DP91 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC27.65■■■□□ 2.02
CSB-PGBD3P0DP91 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC27.65■■■□□ 2.02
CSB-PGBD3P0DP91 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CSB-PGBD3P0DP91 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC27.64■■■□□ 2.02
CSB-PGBD3P0DP91 AC068473.5-201ENST00000616428 2072 ntBASIC27.64■■■□□ 2.01
CSB-PGBD3P0DP91 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CSB-PGBD3P0DP91 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC27.63■■■□□ 2.01
CSB-PGBD3P0DP91 NARF-205ENST00000412079 1760 ntTSL 5 BASIC27.63■■■□□ 2.01
CSB-PGBD3P0DP91 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CSB-PGBD3P0DP91 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CSB-PGBD3P0DP91 AC105020.6-201ENST00000621523 1217 ntBASIC27.63■■■□□ 2.01
CSB-PGBD3P0DP91 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CSB-PGBD3P0DP91 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CSB-PGBD3P0DP91 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CSB-PGBD3P0DP91 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC27.63■■■□□ 2.01
CSB-PGBD3P0DP91 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC27.63■■■□□ 2.01
CSB-PGBD3P0DP91 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms