Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV12-3P01733 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV12-3P01733 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV12-3P01733 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV12-3P01733 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV12-3P01733 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.07■□□□□ 0.16
TRBV12-3P01733 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.07■□□□□ 0.16
TRBV12-3P01733 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV12-3P01733 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV12-3P01733 SLC7A5P1-201ENST00000568957 537 ntBASIC16.07■□□□□ 0.16
TRBV12-3P01733 AC010536.3-201ENST00000620306 533 ntBASIC16.07■□□□□ 0.16
TRBV12-3P01733 RBM17P2-201ENST00000616397 1405 ntBASIC16.07■□□□□ 0.16
TRBV12-3P01733 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV12-3P01733 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV12-3P01733 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV12-3P01733 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV12-3P01733 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV12-3P01733 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV12-3P01733 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TRBV12-3P01733 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV12-3P01733 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV12-3P01733 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV12-3P01733 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRBV12-3P01733 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV12-3P01733 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV12-3P01733 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV12-3P01733 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV12-3P01733 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
TRBV12-3P01733 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV12-3P01733 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.06■□□□□ 0.16
TRBV12-3P01733 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV12-3P01733 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV12-3P01733 AC245052.3-201ENST00000450182 901 ntBASIC16.06■□□□□ 0.16
TRBV12-3P01733 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV12-3P01733 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV12-3P01733 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRBV12-3P01733 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.06■□□□□ 0.16
TRBV12-3P01733 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV12-3P01733 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
TRBV12-3P01733 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TRBV12-3P01733 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV12-3P01733 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV12-3P01733 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV12-3P01733 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV12-3P01733 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV12-3P01733 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV12-3P01733 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 AC080038.1-201ENST00000611274 1154 ntBASIC16.05■□□□□ 0.16
TRBV12-3P01733 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV12-3P01733 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TRBV12-3P01733 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV12-3P01733 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV12-3P01733 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV12-3P01733 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.04■□□□□ 0.16
TRBV12-3P01733 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV12-3P01733 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV12-3P01733 DUX4L16-201ENST00000555130 1264 ntBASIC16.04■□□□□ 0.16
TRBV12-3P01733 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.04■□□□□ 0.16
TRBV12-3P01733 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
TRBV12-3P01733 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV12-3P01733 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV12-3P01733 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV12-3P01733 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV12-3P01733 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV12-3P01733 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 TERF1P5-201ENST00000477545 1207 ntBASIC16.03■□□□□ 0.16
TRBV12-3P01733 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV12-3P01733 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms