Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
KLHL41O60662 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL41O60662 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL41O60662 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL41O60662 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL41O60662 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
KLHL41O60662 AC068587.7-201ENST00000641602 218 ntBASIC20.54■□□□□ 0.88
KLHL41O60662 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL41O60662 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KLHL41O60662 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL41O60662 LINC02228-203ENST00000641970 1355 ntBASIC20.54■□□□□ 0.88
KLHL41O60662 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
KLHL41O60662 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
KLHL41O60662 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.54■□□□□ 0.88
KLHL41O60662 AC003102.1-202ENST00000563394 1796 ntBASIC20.54■□□□□ 0.88
KLHL41O60662 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL41O60662 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KLHL41O60662 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
KLHL41O60662 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.53■□□□□ 0.88
KLHL41O60662 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KLHL41O60662 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.53■□□□□ 0.88
KLHL41O60662 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL41O60662 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.53■□□□□ 0.88
KLHL41O60662 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL41O60662 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
KLHL41O60662 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
KLHL41O60662 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL41O60662 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL41O60662 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.52■□□□□ 0.88
KLHL41O60662 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.52■□□□□ 0.88
KLHL41O60662 KRT18P5-201ENST00000436075 1291 ntBASIC20.52■□□□□ 0.88
KLHL41O60662 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL41O60662 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.52■□□□□ 0.88
KLHL41O60662 AC022517.1-201ENST00000592429 346 ntBASIC20.52■□□□□ 0.88
KLHL41O60662 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.52■□□□□ 0.88
KLHL41O60662 AC087239.1-201ENST00000622671 572 ntBASIC20.52■□□□□ 0.88
KLHL41O60662 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.52■□□□□ 0.88
KLHL41O60662 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL41O60662 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL41O60662 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.52■□□□□ 0.88
KLHL41O60662 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
KLHL41O60662 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL41O60662 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.52■□□□□ 0.87
KLHL41O60662 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
KLHL41O60662 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
KLHL41O60662 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
KLHL41O60662 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.51■□□□□ 0.87
KLHL41O60662 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.51■□□□□ 0.87
KLHL41O60662 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.51■□□□□ 0.87
KLHL41O60662 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL41O60662 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL41O60662 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KLHL41O60662 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL41O60662 AL391422.3-201ENST00000603791 2761 ntBASIC20.5■□□□□ 0.87
KLHL41O60662 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL41O60662 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
KLHL41O60662 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL41O60662 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL41O60662 AC010141.3-201ENST00000456659 717 ntBASIC20.5■□□□□ 0.87
KLHL41O60662 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.5■□□□□ 0.87
KLHL41O60662 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
KLHL41O60662 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.5■□□□□ 0.87
KLHL41O60662 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL41O60662 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL41O60662 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL41O60662 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
KLHL41O60662 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL41O60662 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL41O60662 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
KLHL41O60662 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KLHL41O60662 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KLHL41O60662 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.49■□□□□ 0.87
KLHL41O60662 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.49■□□□□ 0.87
KLHL41O60662 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.49■□□□□ 0.87
KLHL41O60662 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KLHL41O60662 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KLHL41O60662 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms