Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	NDT80	YHR124W	1884 nt		4.43	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	VID27	YNL212W	2349 nt		4.43	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YNL205C	YNL205C	423 nt		4.43	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	KRE5	YOR336W	4098 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	OPI6	YDL096C	327 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YRB1	YDR002W	606 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	DPB4	YDR121W	591 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	RIP1	YEL024W	648 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YER023C-A	YER023C-A	213 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YER079C-A	YER079C-A	339 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YCK3	YER123W	1575 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YHL026C	YHL026C	948 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YJL182C	YJL182C	318 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	FLO10	YKR102W	3510 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YLR076C	YLR076C	423 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	RPC40	YPR110C	1008 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YKL050C	YKL050C	2769 nt		4.42	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	EGT2	YNL327W	3126 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	FLC1	YPL221W	2382 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	PMT6	YGR199W	2280 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YCR075W-A	YCR075W-A	228 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YFR010W-A	YFR010W-A	189 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	LSO1	YJR005C-A	282 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	FCF2	YLR051C	654 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YMR294W-A	YMR294W-A	360 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YBR016W	YBR016W	387 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	FEX1	YOR390W	1128 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	RRD2	YPL152W	1077 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	AKL1	YBR059C	3327 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	GWT1	YJL091C	1473 nt		4.41	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	NHX1	YDR456W	1902 nt		4.4	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	RAD52	YML032C	1416 nt		4.4	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	NAT1	YDL040C	2565 nt		4.4	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	NUP85	YJR042W	2235 nt		4.4	□□□□□ -1.7
TY4B-P	A0A0B7P3V8	YDR545C-A	YDR545C-A	480 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	ISD11	YER048W-A	285 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)C	tK(CUU)C	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)D1	tK(CUU)D1	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)D2	tK(CUU)D2	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)E1	tK(CUU)E1	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)E2	tK(CUU)E2	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)F	tK(CUU)F	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)G1	tK(CUU)G1	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)G2	tK(CUU)G2	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)G3	tK(CUU)G3	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)I	tK(CUU)I	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)J	tK(CUU)J	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)K	tK(CUU)K	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)M	tK(CUU)M	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	tK(CUU)P	tK(CUU)P	73 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	HIS5	YIL116W	1158 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YBL108W	YBL108W	306 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YOR170W	YOR170W	306 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YPR077C	YPR077C	372 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	CBF5	YLR175W	1452 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YPR003C	YPR003C	2265 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	SCY1	YGL083W	2415 nt		4.4	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	DBF20	YPR111W	1695 nt		4.39	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	snR68	snR68	136 nt		4.39	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	MIC19	YFR011C	513 nt		4.39	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YGL165C	YGL165C	579 nt		4.39	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	SMA2	YML066C	1110 nt		4.39	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	GPI10	YGL142C	1851 nt		4.39	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YER158C	YER158C	1722 nt		4.38	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	STI1	YOR027W	1770 nt		4.38	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YPS5	YGL259W	498 nt		4.38	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YGR151C	YGR151C	336 nt		4.38	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	MRPL39	YML009C	213 nt		4.38	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	NOC2	YOR206W	2133 nt		4.38	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	FEX2	YPL279C	1128 nt		4.38	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	SNF2	YOR290C	5112 nt		4.38	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	HDA2	YDR295C	2025 nt		4.38	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	ISW2	YOR304W	3363 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	SAP4	YGL229C	2457 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	SWI3	YJL176C	2478 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	SYO1	YDL063C	1863 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	PEX30	YLR324W	1572 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	PRM1	YNL279W	1986 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YDL007C-A	YDL007C-A	258 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	PHM6	YDR281C	315 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YGL188C-A	YGL188C-A	141 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	POG1	YIL122W	1056 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YIL171W	YIL171W	330 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	ATG33	YLR356W	594 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	ATX1	YNL259C	222 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	MIS1	YBR084W	2928 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	DSF2	YBR007C	2211 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	MUB1	YMR100W	1863 nt		4.37	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	SMI1	YGR229C	1518 nt		4.36	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	RPS18A	YDR450W	441 nt		4.36	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YLR466C-B	YLR466C-B	117 nt		4.36	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YMR307C-A	YMR307C-A	195 nt		4.36	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	PEX17	YNL214W	600 nt		4.36	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	SKN7	YHR206W	1869 nt		4.36	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	IOC2	YLR095C	2439 nt		4.36	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	IMD4	YML056C	1575 nt		4.36	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	YJL132W	YJL132W	2253 nt		4.35	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	PEP5	YMR231W	3090 nt		4.35	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	CDC36	YDL165W	576 nt		4.35	□□□□□ -1.71
TY4B-P	A0A0B7P3V8	SNA2	YDR525W-A	240 nt		4.35	□□□□□ -1.71

Retrieved 100 of 7,029 protein–RNA pairs in 237.1 ms