Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gm8493-201ENSMUST00000196881 489 ntBASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gm13241-201ENSMUST00000094493 780 ntBASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gm43173-201ENSMUST00000202246 593 ntBASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms