Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HPR-201ENST00000356967 1110 ntTSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 RN7SKP134-201ENST00000363960 269 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 RPL10P11-201ENST00000414541 616 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AL592049.1-201ENST00000422490 1188 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 LINC00864-201ENST00000429129 746 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 PSAT1P3-201ENST00000439132 1111 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC008074.1-201ENST00000441630 723 ntTSL 3 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 UBE2D4-206ENST00000446008 783 ntTSL 2 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 EPN2-AS1-201ENST00000451099 1190 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AL390778.1-201ENST00000452377 527 ntTSL 3 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC092953.1-201ENST00000460975 543 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC099487.1-201ENST00000501405 391 ntTSL 3 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC079238.1-201ENST00000509840 1009 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC245187.1-201ENST00000520162 559 ntTSL 4 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC011716.1-201ENST00000520744 613 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 FANCD2OS-206ENST00000524279 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 CD59-208ENST00000527577 686 ntAPPRIS P2 TSL 3 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC068768.1-202ENST00000541002 1110 ntTSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 ABHD17AP8-201ENST00000569698 574 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC021224.1-201ENST00000573479 857 ntTSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC087392.2-201ENST00000573877 585 ntTSL 2 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC119868.1-201ENST00000579307 336 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC011466.2-201ENST00000594589 359 ntTSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 DMRTC1-202ENST00000596389 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC020549.2-201ENST00000604893 508 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 TUSC8-202ENST00000607312 628 ntTSL 4 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 SUSD2P2-201ENST00000611186 758 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 MIR6742-201ENST00000622338 62 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 DAB2-217ENST00000545653 4537 ntTSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 PTK2B-210ENST00000517339 3914 ntTSL 2 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 NAA50-210ENST00000616174 3257 ntTSL 2 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC005304.2-201ENST00000580134 1982 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AC090987.1-201ENST00000523502 2072 ntTSL 2 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 PAX6-235ENST00000638629 2844 ntTSL 2 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 ZNF587B-203ENST00000594901 2118 ntAPPRIS P1 TSL 4 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AL591742.2-201ENST00000632517 2119 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 KLKB1-207ENST00000513864 2175 ntTSL 2 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 TOB1-201ENST00000268957 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 KLHL30-AS1-201ENST00000623136 3106 ntBASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 GAPDHP72-203ENST00000638093 1602 ntTSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 GTF2H3-214ENST00000618160 3252 ntTSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 MROH5-205ENST00000621837 4164 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
NPIPA3F8WFD2 AF001548.3-201ENST00000624545 1743 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 CALCR-201ENST00000359558 3696 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 TMCO4-201ENST00000294543 2974 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 MICAL3-202ENST00000383094 2963 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 XRCC6-203ENST00000402580 2006 ntTSL 2 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 CYP4F62P-202ENST00000439137 2144 ntTSL 2 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 OR10K1-205ENST00000641535 2124 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 OR10K1-206ENST00000641971 2121 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 KPNA5-201ENST00000356348 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 SEPSECS-202ENST00000382103 5496 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 WDR20-204ENST00000342702 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 NME9-202ENST00000333911 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 MIR370-201ENST00000362135 75 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AL512353.1-201ENST00000414798 514 ntTSL 3 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AC141930.2-201ENST00000419028 555 ntTSL 4 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 TPI1P1-201ENST00000420977 750 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AC006378.1-201ENST00000426193 563 ntTSL 4 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 DUXAP7-201ENST00000431038 689 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AC005013.1-201ENST00000436594 588 ntTSL 4 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 LINC02082-201ENST00000484765 710 ntTSL 2 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AL138976.1-201ENST00000494237 536 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 RN7SL252P-201ENST00000496274 297 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 LINC01341-205ENST00000509202 503 ntTSL 4 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 S100Z-202ENST00000513010 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 LECT2-204ENST00000514447 789 ntTSL 2 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 TIMM8B-204ENST00000541231 805 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AC002094.3-201ENST00000555059 851 ntAPPRIS P1 TSL 4 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AC131391.1-201ENST00000565359 520 ntTSL 2 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AL356740.3-201ENST00000598534 649 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 PPARGC1A-216ENST00000612355 936 ntTSL 5 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 S100Z-203ENST00000613039 671 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AC019322.3-201ENST00000616104 478 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 TMC8-202ENST00000589691 3927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 CD160-202ENST00000369288 1424 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AP004290.1-201ENST00000440915 1412 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 AP003035.1-201ENST00000533748 1417 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 DDX55P1-201ENST00000603334 1414 ntBASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 CMSS1-201ENST00000421999 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 TROAP-206ENST00000547923 1652 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 MMS19-203ENST00000370782 3532 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 TRMO-207ENST00000611338 3635 ntTSL 5 BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 IFT122-203ENST00000348417 3877 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
NPIPA3F8WFD2 SGO1-206ENST00000421451 1969 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 851.6 ms