Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 TERF1P2-201ENST00000583350 1212 ntBASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 AC053503.5-201ENST00000601508 636 ntBASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRB4X5D2U9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 EEF1DP3-203ENST00000566025 782 ntBASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRB4X5D2U9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRB4X5D2U9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 CCDC92B-201ENST00000575506 885 ntBASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 AC019069.1-201ENST00000610008 1333 ntBASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms