Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA7Q9Y5G6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 AL121832.2-201ENST00000610979 668 ntBASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 AC231657.2-201ENST00000624556 255 ntBASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGA7Q9Y5G6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 CD99P1-205ENST00000527459 561 ntBASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 KRT87P-202ENST00000534226 1464 ntBASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA7Q9Y5G6 AC009237.3-201ENST00000393279 1427 ntBASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 LINC01521-201ENST00000504184 1943 ntBASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA7Q9Y5G6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 PKD1P6-201ENST00000343738 4769 ntBASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 AC005224.4-201ENST00000583262 1652 ntBASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA7Q9Y5G6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 TSPY6P-201ENST00000448518 926 ntBASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 AC083906.2-201ENST00000511578 360 ntBASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 AC104187.1-201ENST00000607510 612 ntBASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGA7Q9Y5G6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA7Q9Y5G6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA7Q9Y5G6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA7Q9Y5G6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHGA7Q9Y5G6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDHGA7Q9Y5G6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms