Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SLC7A5P2-201ENST00000553010 536 ntBASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 UBE2DNL-204ENST00000602536 740 ntBASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 AC133041.1-202ENST00000642053 222 ntBASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHB9Q9Y5E1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 DUX4L16-201ENST00000555130 1264 ntBASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHB9Q9Y5E1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 AC093827.2-201ENST00000512654 315 ntBASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 MIR4651-201ENST00000582622 73 ntBASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 AC120498.10-201ENST00000621827 505 ntBASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB9Q9Y5E1 Z98882.1-201ENST00000622160 2253 ntBASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 AC069152.1-201ENST00000438030 544 ntBASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHB9Q9Y5E1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 GUSBP6-202ENST00000438529 1198 ntBASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 AF201337.1-201ENST00000520239 748 ntBASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB9Q9Y5E1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHB9Q9Y5E1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB9Q9Y5E1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 MYCNOS-205ENST00000641950 531 ntBASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PCDHB9Q9Y5E1 KRT16P2-201ENST00000414673 1423 ntBASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms