Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 AC010536.3-201ENST00000620306 533 ntBASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 AC073111.5-205ENST00000641717 521 ntBASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPUSD1Q9UJJ7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 FEM1AP4-201ENST00000443167 1987 ntBASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.31■□□□□ 0.36
RPUSD1Q9UJJ7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 CDCA4P2-201ENST00000441182 718 ntBASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 AC090192.1-201ENST00000517740 490 ntBASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 DUX4L16-201ENST00000555130 1264 ntBASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RPUSD1Q9UJJ7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 AC026185.1-201ENST00000445748 174 ntBASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 AL137060.1-201ENST00000618151 2648 ntBASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RPUSD1Q9UJJ7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 AL024507.2-201ENST00000606070 2574 ntBASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 RAP2CP1-201ENST00000605103 478 ntBASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 AC231657.2-201ENST00000624556 255 ntBASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.28■□□□□ 0.36
RPUSD1Q9UJJ7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms