Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 CYP2T1P-201ENST00000432607 1285 ntBASIC20.71■□□□□ 0.91
SPASTQ9UBP0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 AC008694.1-202ENST00000636953 945 ntBASIC20.71■□□□□ 0.91
SPASTQ9UBP0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPASTQ9UBP0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.7■□□□□ 0.91
SPASTQ9UBP0 KRT16P2-201ENST00000414673 1423 ntBASIC20.7■□□□□ 0.9
SPASTQ9UBP0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 AC133041.1-202ENST00000642053 222 ntBASIC20.7■□□□□ 0.9
SPASTQ9UBP0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.7■□□□□ 0.9
SPASTQ9UBP0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 AC069152.1-201ENST00000438030 544 ntBASIC20.69■□□□□ 0.9
SPASTQ9UBP0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 AC069236.1-201ENST00000604339 616 ntBASIC20.69■□□□□ 0.9
SPASTQ9UBP0 OR10C1-204ENST00000622521 1039 ntBASIC20.69■□□□□ 0.9
SPASTQ9UBP0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPASTQ9UBP0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 ABHD17AP1-201ENST00000358206 933 ntBASIC20.68■□□□□ 0.9
SPASTQ9UBP0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 KRT18P6-201ENST00000555540 1265 ntBASIC20.68■□□□□ 0.9
SPASTQ9UBP0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.68■□□□□ 0.9
SPASTQ9UBP0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 AC073210.2-201ENST00000430369 194 ntBASIC20.67■□□□□ 0.9
SPASTQ9UBP0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms