Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 NCF1B-203ENST00000435988 1254 ntBASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.38■□□□□ 0.37
SSBP3Q9BWW4 C11orf96-202ENST00000528572 1834 ntBASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 GPX1P1-201ENST00000388829 606 ntBASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 AC007322.4-201ENST00000509611 723 ntBASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 AL121832.2-201ENST00000610979 668 ntBASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSBP3Q9BWW4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 AL109923.1-201ENST00000618799 583 ntBASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSBP3Q9BWW4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 AC104771.1-201ENST00000603335 964 ntBASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 AC243732.1-201ENST00000612648 864 ntBASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 AL050303.2-201ENST00000619798 666 ntBASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 AL024507.2-201ENST00000606070 2574 ntBASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 RBM17P2-201ENST00000616397 1405 ntBASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SSBP3Q9BWW4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 AC245052.3-201ENST00000450182 901 ntBASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSBP3Q9BWW4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms