Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 TPS2YDR074W 2691 nt1.93□□□□□ -2.1
ATG40Q99325 AIM6YDL237W 1173 nt1.93□□□□□ -2.1
ATG40Q99325 YJL169WYJL169W 369 nt1.93□□□□□ -2.1
ATG40Q99325 MET14YKL001C 609 nt1.93□□□□□ -2.1
ATG40Q99325 SUT2YPR009W 807 nt1.93□□□□□ -2.1
ATG40Q99325 KAR5YMR065W 1515 nt1.92□□□□□ -2.1
ATG40Q99325 SCP160YJL080C 3669 nt1.92□□□□□ -2.1
ATG40Q99325 RLI1YDR091C 1827 nt1.92□□□□□ -2.1
ATG40Q99325 SNU23YDL098C 585 nt1.92□□□□□ -2.1
ATG40Q99325 MFA1YDR461W 111 nt1.92□□□□□ -2.1
ATG40Q99325 YAP5YIR018W 738 nt1.92□□□□□ -2.1
ATG40Q99325 YKL165C-AYKL165C-A 234 nt1.92□□□□□ -2.1
ATG40Q99325 RPS1AYLR441C 768 nt1.92□□□□□ -2.1
ATG40Q99325 GAB1YLR459W 1185 nt1.92□□□□□ -2.1
ATG40Q99325 PRM6YML047C 1059 nt1.92□□□□□ -2.1
ATG40Q99325 ADI1YMR009W 540 nt1.92□□□□□ -2.1
ATG40Q99325 PDR17YNL264C 1053 nt1.92□□□□□ -2.1
ATG40Q99325 TSR4YOL022C 1227 nt1.92□□□□□ -2.1
ATG40Q99325 TPT1YOL102C 693 nt1.92□□□□□ -2.1
ATG40Q99325 ARF3YOR094W 552 nt1.92□□□□□ -2.1
ATG40Q99325 GCY1YOR120W 939 nt1.92□□□□□ -2.1
ATG40Q99325 snR35snR35 204 nt1.92□□□□□ -2.1
ATG40Q99325 YLR446WYLR446W 1302 nt1.91□□□□□ -2.1
ATG40Q99325 ARP9YMR033W 1404 nt1.91□□□□□ -2.1
ATG40Q99325 YJL181WYJL181W 1836 nt1.91□□□□□ -2.1
ATG40Q99325 STH1YIL126W 4080 nt1.91□□□□□ -2.1
ATG40Q99325 SLY41YOR307C 1362 nt1.91□□□□□ -2.1
ATG40Q99325 DSE2YHR143W 978 nt1.91□□□□□ -2.1
ATG40Q99325 PFS1YHR185C 714 nt1.91□□□□□ -2.1
ATG40Q99325 YIL102C-AYIL102C-A 228 nt1.91□□□□□ -2.1
ATG40Q99325 RPA12YJR063W 378 nt1.91□□□□□ -2.1
ATG40Q99325 YMR099CYMR099C 894 nt1.91□□□□□ -2.1
ATG40Q99325 HSP10YOR020C 321 nt1.91□□□□□ -2.1
ATG40Q99325 VTC3YPL019C 2508 nt1.9□□□□□ -2.1
ATG40Q99325 VPS41YDR080W 2979 nt1.9□□□□□ -2.1
ATG40Q99325 TDA10YGR205W 873 nt1.9□□□□□ -2.11
ATG40Q99325 NNF1YJR112W 606 nt1.9□□□□□ -2.11
ATG40Q99325 ERV41YML067C 1059 nt1.9□□□□□ -2.11
ATG40Q99325 YOL166CYOL166C 339 nt1.9□□□□□ -2.11
ATG40Q99325 GRX7YBR014C 612 nt1.9□□□□□ -2.11
ATG40Q99325 RPL36BYPL249C-A 303 nt1.9□□□□□ -2.11
ATG40Q99325 MUB1YMR100W 1863 nt1.9□□□□□ -2.11
ATG40Q99325 YFR016CYFR016C 3702 nt1.9□□□□□ -2.11
ATG40Q99325 DNF1YER166W 4716 nt1.89□□□□□ -2.11
ATG40Q99325 VHR1YIL056W 1923 nt1.89□□□□□ -2.11
ATG40Q99325 RRP12YPL012W 3687 nt1.89□□□□□ -2.11
ATG40Q99325 YDR124WYDR124W 975 nt1.89□□□□□ -2.11
ATG40Q99325 TIM11YDR322C-A 291 nt1.89□□□□□ -2.11
ATG40Q99325 TIF35YDR429C 825 nt1.89□□□□□ -2.11
ATG40Q99325 SPT15YER148W 723 nt1.89□□□□□ -2.11
ATG40Q99325 YGR018CYGR018C 330 nt1.89□□□□□ -2.11
ATG40Q99325 YIL046W-AYIL046W-A 165 nt1.89□□□□□ -2.11
ATG40Q99325 PSY1YKL076C 384 nt1.89□□□□□ -2.11
ATG40Q99325 SRL3YKR091W 741 nt1.89□□□□□ -2.11
ATG40Q99325 YLL044WYLL044W 447 nt1.89□□□□□ -2.11
ATG40Q99325 AGE1YDR524C 1449 nt1.89□□□□□ -2.11
ATG40Q99325 UBP2YOR124C 3819 nt1.89□□□□□ -2.11
ATG40Q99325 MAK5YBR142W 2322 nt1.89□□□□□ -2.11
ATG40Q99325 MCD1YDL003W 1701 nt1.88□□□□□ -2.11
ATG40Q99325 KOG1YHR186C 4674 nt1.88□□□□□ -2.11
ATG40Q99325 TFC3YAL001C 3483 nt1.88□□□□□ -2.11
ATG40Q99325 YNL193WYNL193W 1677 nt1.88□□□□□ -2.11
ATG40Q99325 RPL27BYDR471W 411 nt1.88□□□□□ -2.11
ATG40Q99325 RSR1YGR152C 819 nt1.88□□□□□ -2.11
ATG40Q99325 AYR1YIL124W 894 nt1.88□□□□□ -2.11
ATG40Q99325 PAU14YIL176C 363 nt1.88□□□□□ -2.11
ATG40Q99325 PAU1YJL223C 363 nt1.88□□□□□ -2.11
ATG40Q99325 RPL6BYLR448W 531 nt1.88□□□□□ -2.11
ATG40Q99325 ATG16YMR159C 453 nt1.88□□□□□ -2.11
ATG40Q99325 YOR283WYOR283W 693 nt1.88□□□□□ -2.11
ATG40Q99325 DGK1YOR311C 873 nt1.88□□□□□ -2.11
ATG40Q99325 ISU1YPL135W 498 nt1.88□□□□□ -2.11
ATG40Q99325 ERV15YBR210W 429 nt1.88□□□□□ -2.11
ATG40Q99325 FIR1YER032W 2631 nt1.88□□□□□ -2.11
ATG40Q99325 SAP185YJL098W 3177 nt1.88□□□□□ -2.11
ATG40Q99325 APL5YPL195W 2799 nt1.88□□□□□ -2.11
ATG40Q99325 TRS130YMR218C 3309 nt1.88□□□□□ -2.11
ATG40Q99325 SAP190YKR028W 3102 nt1.88□□□□□ -2.11
ATG40Q99325 DUG2YBR281C 2637 nt1.87□□□□□ -2.11
ATG40Q99325 UFD4YKL010C 4452 nt1.87□□□□□ -2.11
ATG40Q99325 ATP22YDR350C 2055 nt1.87□□□□□ -2.11
ATG40Q99325 CDC5YMR001C 2118 nt1.87□□□□□ -2.11
ATG40Q99325 RPL13AYDL082W 600 nt1.87□□□□□ -2.11
ATG40Q99325 YFH7YFR007W 1062 nt1.87□□□□□ -2.11
ATG40Q99325 YHR180W-AYHR180W-A 183 nt1.87□□□□□ -2.11
ATG40Q99325 YJL052C-AYJL052C-A 120 nt1.87□□□□□ -2.11
ATG40Q99325 SFT1YKL006C-A 294 nt1.87□□□□□ -2.11
ATG40Q99325 YBL055CYBL055C 1257 nt1.87□□□□□ -2.11
ATG40Q99325 PEX15YOL044W 1152 nt1.87□□□□□ -2.11
ATG40Q99325 INO80YGL150C 4470 nt1.87□□□□□ -2.11
ATG40Q99325 YOL057WYOL057W 2136 nt1.87□□□□□ -2.11
ATG40Q99325 KHA1YJL094C 2622 nt1.87□□□□□ -2.11
ATG40Q99325 KRE33YNL132W 3171 nt1.86□□□□□ -2.11
ATG40Q99325 CLN3YAL040C 1743 nt1.86□□□□□ -2.11
ATG40Q99325 snR68snR68 136 nt1.86□□□□□ -2.11
ATG40Q99325 YDL032WYDL032W 312 nt1.86□□□□□ -2.11
ATG40Q99325 YHL044WYHL044W 708 nt1.86□□□□□ -2.11
ATG40Q99325 PPE1YHR075C 1203 nt1.86□□□□□ -2.11
ATG40Q99325 ASG7YJL170C 630 nt1.86□□□□□ -2.11
ATG40Q99325 YAL034C-BYAL034C-B 354 nt1.86□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms