Protein–RNA interactions for Protein: Q96EX2

RNFT2, RING finger and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2Q96EX2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNFT2Q96EX2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNFT2Q96EX2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNFT2Q96EX2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNFT2Q96EX2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNFT2Q96EX2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNFT2Q96EX2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNFT2Q96EX2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.83■□□□□ 0.61
RNFT2Q96EX2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
RNFT2Q96EX2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.83■□□□□ 0.61
RNFT2Q96EX2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.83■□□□□ 0.61
RNFT2Q96EX2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNFT2Q96EX2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.83■□□□□ 0.61
RNFT2Q96EX2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RNFT2Q96EX2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 AL391422.3-201ENST00000603791 2761 ntBASIC18.83■□□□□ 0.6
RNFT2Q96EX2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.83■□□□□ 0.6
RNFT2Q96EX2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 AP006587.3-201ENST00000525742 1516 ntBASIC18.82■□□□□ 0.6
RNFT2Q96EX2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RNFT2Q96EX2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 AC007952.6-201ENST00000573168 2673 ntBASIC18.81■□□□□ 0.6
RNFT2Q96EX2 AC003957.1-201ENST00000625108 2673 ntBASIC18.81■□□□□ 0.6
RNFT2Q96EX2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNFT2Q96EX2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNFT2Q96EX2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNFT2Q96EX2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNFT2Q96EX2 RARRES2P1-201ENST00000474487 481 ntBASIC18.8■□□□□ 0.6
RNFT2Q96EX2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.8■□□□□ 0.6
RNFT2Q96EX2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNFT2Q96EX2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms